 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Itr_sc003303.1_g00004.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
|
| Family |
ERF |
| Protein Properties |
Length: 131aa MW: 14636.9 Da PI: 11.0421 |
| Description |
ERF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Itr_sc003303.1_g00004.1 | genome | Kazusa | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 32.2 | 2.6e-10 | 32 | 62 | 2 | 38 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgt 38
ykG+r +k +g+WvAeI+d ++r +lg++ t
Itr_sc003303.1_g00004.1 32 PYKGIRMRK-WGKWVAEIHDT-----NTRLWLGSYYT 62
59*****99.**********5.....5*******965 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 131 aa
Download sequence Send
to blast |
MAAGGGDGVG ASICSRGRGA EKKKRGPKQK NPYKGIRMRK WGKWVAEIHD TNTRLWLGSY 60
YTSGTAAVLP VPTTWPSFTC VARQPSLTSP TTWLAMATTA NSCQRRFRIE PQQLDIGLMQ 120
FRGDYIYRPL R
|
| Best hit in Arabidopsis thaliana ? help
Back to Top |
| Hit ID |
E-value |
Description |
| AT3G50260.1 | 3e-13 | cooperatively regulated by ethylene and jasmonate 1 |
