 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Itr_sc002312.1_g00005.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
|
| Family |
ERF |
| Protein Properties |
Length: 271aa MW: 30664.7 Da PI: 5.4457 |
| Description |
ERF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Itr_sc002312.1_g00005.1 | genome | Kazusa | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 56.8 | 5.5e-18 | 34 | 83 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
++ GVr+++ +grWvAeI+d ++ + r +lg++ +aeeAa+a+++a+ l+g
Itr_sc002312.1_g00005.1 34 KFVGVRQRP-SGRWVAEIKDTTQ---NIRMWLGTYESAEEAARAYDQAAFLLRG 83
799******.7*********433...5**********************99987 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 271 aa
Download sequence Send
to blast |
MEIHFQQQHE DEIFSSLQKE SGWNKQRPRK NKNKFVGVRQ RPSGRWVAEI KDTTQNIRMW 60
LGTYESAEEA ARAYDQAAFL LRGSRSTRTR TNFETIAPPD SNSPLASRIR NLLNTKKKSS 120
AKLQRIGDFS SSSSSSITAS GQSGGSAENQ DTKSSSDEAL DFGYDDEIRE SDDRVFDNTY 180
KPDATSSTSL LQSWSFEQGL EFAQQMIDIP KTEGEGEVVG FSEFERMKVE RSISASLYAV 240
HGVQEYMHMQ AINHSSQTQT QTLWDLPPFF S
|
