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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Itr_sc001794.1_g00009.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family |
ERF |
Protein Properties |
Length: 405aa MW: 43662.5 Da PI: 5.2449 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Itr_sc001794.1_g00009.1 | genome | Kazusa | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 61.4 | 2e-19 | 35 | 86 | 1 | 56 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkklege 56
+++ GVr+++ +grWvAeI+d ++ r +lg+f+taeeAa+a+++a++ l+g+
Itr_sc001794.1_g00009.1 35 PRFVGVRQRP-SGRWVAEIKD----SlQKVRLWLGTFDTAEEAARAYDQAARTLRGA 86
6799******.7*********....4456*************************985 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 405 aa
Download sequence Send
to blast |
MKQTLPPPPQ SQEQLPPLPS DVIRTRRKPS SRGHPRFVGV RQRPSGRWVA EIKDSLQKVR 60 LWLGTFDTAE EAARAYDQAA RTLRGANART NFDLPESDSG EGGCSLLPGN LEPFSFEDAC 120 RSEEPDGGLV GALKAKLFSS ESSRLFIQSN ASNATPSTIA KPQDENINNN LKNNDGGDKI 180 SSMAAAAAQF SSTNGLIDAT STSYLPNVVR AEKPKFNLDH YTPQTEQNTN IHHNYNIDHI 240 SLLTPSDHPM NTPTWLNPSH TIAATSNMMT QWPNDQTVGW IDTLQTGRGG HEMEPCSWLP 300 ISGLSSSYPE NSLDILNTPP MIMSQIGGGG ALPAETQIVQ CENEYWNSSS AAAAAAAVAG 360 ASGGAWDPFM LSSVLGVATG EYVGVGGPRW PREGKKWGFG MGEDK
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3D Structure ? help Back to Top |
 |
PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
5wx9_A | 2e-15 | 34 | 92 | 12 | 71 | Ethylene-responsive transcription factor ERF096 |