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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Itr_sc001304.1_g00006.1 |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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| Family |
WRKY |
| Protein Properties |
Length: 236aa MW: 26986.7 Da PI: 8.0848 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Itr_sc001304.1_g00006.1 | genome | Kazusa | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 96.9 | 1.4e-30 | 53 | 111 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
+D ++WrKYGqK++kgs++pr+YYrC+++ gC++kk+v+rs++d +v++itY+++Hnh+
Itr_sc001304.1_g00006.1 53 SDSWSWRKYGQKPIKGSPHPRGYYRCSTSkGCSAKKQVQRSRTDASVLIITYTSTHNHP 111
69************************9988****************************7 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 236 aa
Download sequence Send
to blast |
MDNTKSPASE FKNSRTLRRA SSSKKRNMAQ KVVVRVKLGE GDGRKRKSEG PPSDSWSWRK 60
YGQKPIKGSP HPRGYYRCST SKGCSAKKQV QRSRTDASVL IITYTSTHNH PGPPEDNNPT 120
TPVPEEEGEE AQMEQHRTRL KDNGYEEDSF HYSQSPFNTS EHIIINRPDD NYLLGTSSSF 180
LLDGEPLSCR YPHFMDFSTP KSQENYDFYD ELEELPHTSS FITYTFFKDT ISVNSI
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