 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Itr_sc001284.1_g00003.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
|
| Family |
ERF |
| Protein Properties |
Length: 247aa MW: 27349.7 Da PI: 9.6811 |
| Description |
ERF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Itr_sc001284.1_g00003.1 | genome | Kazusa | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 58.5 | 1.6e-18 | 117 | 165 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
y+GVr ++ +grW AeIrd r r++lg+f+t+eeAa+a++ a++ l+g
Itr_sc001284.1_g00003.1 117 YRGVRKRP-WGRWSAEIRDrI----GRCRHWLGTFDTPEEAARAYDVAARWLRG 165
9*******.**********32....25*********************997776 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 247 aa
Download sequence Send
to blast |
MSSSSRFHMF QTTQNLDSLL LKQHQYSYFD DMQSFHSISP FPVDGPPPPP PQSAGISGDF 60
SVCEEVKGES PVLEGIAAVV GERVLFGRPE NLRDEEIAAA AAAGVEKRSG EEKQRSYRGV 120
RKRPWGRWSA EIRDRIGRCR HWLGTFDTPE EAARAYDVAA RWLRGSKART NFEIPPVLPP 180
SSSSSSSSET RKKRKLSNGG DEEVKNKTKK NKCAVVTSAA QLFSSFQNTA IAKGNNLPLE 240
LDLKLSH
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
