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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Itr_sc001284.1_g00003.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family |
ERF |
Protein Properties |
Length: 247aa MW: 27349.7 Da PI: 9.6811 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Itr_sc001284.1_g00003.1 | genome | Kazusa | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 58.5 | 1.6e-18 | 117 | 165 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
y+GVr ++ +grW AeIrd r r++lg+f+t+eeAa+a++ a++ l+g
Itr_sc001284.1_g00003.1 117 YRGVRKRP-WGRWSAEIRDrI----GRCRHWLGTFDTPEEAARAYDVAARWLRG 165
9*******.**********32....25*********************997776 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 247 aa
Download sequence Send
to blast |
MSSSSRFHMF QTTQNLDSLL LKQHQYSYFD DMQSFHSISP FPVDGPPPPP PQSAGISGDF 60 SVCEEVKGES PVLEGIAAVV GERVLFGRPE NLRDEEIAAA AAAGVEKRSG EEKQRSYRGV 120 RKRPWGRWSA EIRDRIGRCR HWLGTFDTPE EAARAYDVAA RWLRGSKART NFEIPPVLPP 180 SSSSSSSSET RKKRKLSNGG DEEVKNKTKK NKCAVVTSAA QLFSSFQNTA IAKGNNLPLE 240 LDLKLSH
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Functional Description ? help
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Source |
Description |
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |