PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Itr_sc000761.1_g00009.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | bZIP | ||||||||
Protein Properties | Length: 176aa MW: 20401 Da PI: 8.5114 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 45.1 | 2.2e-14 | 92 | 141 | 5 | 54 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54 +r+rr+++NRe+ArrsR RK+ ++eL v L +eN++L ++l++ ++ Itr_sc000761.1_g00009.1 92 RRQRRMISNRESARRSRMRKQRHLDELWSQVVRLRSENHSLLDKLNQASE 141 79*************************************99966666544 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 3.2E-14 | 88 | 152 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.668 | 90 | 142 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 7.2E-12 | 90 | 142 | No hit | No description |
SuperFamily | SSF57959 | 1.21E-12 | 92 | 141 | No hit | No description |
Pfam | PF00170 | 9.7E-12 | 92 | 142 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14702 | 3.67E-19 | 93 | 143 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 95 | 110 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 176 aa Download sequence Send to blast |
MIPSETMGIT YISPENSPPL PLPLPLPLPL DLTFMHNTFH FSRFLTNLPN YHSTPLQPIP 60 DLTQNNPSSC LGNNSTSDES YDKTQLRLMN ERRQRRMISN RESARRSRMR KQRHLDELWS 120 QVVRLRSENH SLLDKLNQAS EKHGEAVREN ARLKEEAADL RRLLAEAQLA GWSFDD |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 104 | 111 | RRSRMRKQ |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor involved in somatic embryogenesis. Acts as positive regulator of BHLH109. {ECO:0000269|PubMed:26973252}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_019164654.1 | 3e-87 | PREDICTED: basic leucine zipper 8-like | ||||
Swissprot | Q9FMC2 | 8e-30 | BZP43_ARATH; Basic leucine zipper 43 | ||||
TrEMBL | A0A1S4CIE3 | 1e-59 | A0A1S4CIE3_TOBAC; basic leucine zipper 43-like | ||||
STRING | XP_009611005.1 | 2e-60 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA947 | 24 | 92 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G13600.1 | 3e-32 | basic leucine-zipper 58 |
Publications ? help Back to Top | |||
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