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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Itr_sc000625.1_g00007.1 |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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| Family |
ERF |
| Protein Properties |
Length: 217aa MW: 24470.3 Da PI: 8.4474 |
| Description |
ERF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Itr_sc000625.1_g00007.1 | genome | Kazusa | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 56.9 | 5.1e-18 | 126 | 176 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
+y+GVr+++ +g+++AeIrdp+ r++lg+++t +Aa+a++ a+ k++g
Itr_sc000625.1_g00007.1 126 RYRGVRRRP-WGKFAAEIRDPTRK--GSRIWLGTYDTDIDAARAYDCAAFKMRG 176
7********.**********8542..4*************************98 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 217 aa
Download sequence Send
to blast |
MNDTCMMTTT DEYMTLDLIS QYLLGDFAST EAFIGNLGFC FPDDFNDFRP FSGSDKPESS 60
TSVSDSVSPV SDLKRPDSPS RYFNLDLDFP EFESKPDIVR STPDSSSKLQ NSAGEKESGN 120
GGKGRRYRGV RRRPWGKFAA EIRDPTRKGS RIWLGTYDTD IDAARAYDCA AFKMRGRKAI 180
LNFPLEAGKS GPPVNHGRNR RREMKSREVS RVKEEIF
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