PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

ERF

Protein Properties

Length: 166aa MW: 17827.9 Da PI: 5.7234

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Itr_sc000436.1_g00032.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	53.4	6.3e-17	12	60	2	54
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkle 54 +y+GVr++k +g+Wv+eIr+p g + r +lg++ t+e Aa a++ a +l+ Itr_sc000436.1_g00032.1 12 RYRGVRRRK-WGKWVSEIRVP---G-TqDRLWLGTYATPEAAAVAHDIASVCLR 60 7***998.******8...3.35******************998887 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF00847	8.3E-10	12	56	IPR001471	AP2/ERF domain
PROSITE profile	PS51032	21.628	12	71	IPR001471	AP2/ERF domain
SMART	SM00380	1.7E-27	12	77	IPR001471	AP2/ERF domain
Gene3D	G3DSA:3.30.730.10	1.2E-25	12	72	IPR001471	AP2/ERF domain
SuperFamily	SSF54171	4.05E-17	12	72	IPR016177	DNA-binding domain
PRINTS	PR00367	2.8E-9	13	24	IPR001471	AP2/ERF domain
CDD	cd00018	5.81E-18	20	73	No hit	No description
PRINTS	PR00367	2.8E-9	35	51	IPR001471	AP2/ERF domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0005737	Cellular Component	cytoplasm
GO:0003677	Molecular Function	DNA binding
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 166 aa Download sequence Send to blast
MSSAGGEESQ RRYRGVRRRK WGKWVSEIRV PGTQDRLWLG TYATPEAAAV AHDIASVCLR 60 ETASLDKLNF PALMPPAGVG RGMSPRSVQK VASDAGMAVD AHQRLLLQPP QAVEFSGGGE 120 NRWGGGEAAE EVFRWAETPC CSSGEGSGIS EEAHQALSIS VDDYLV

Functional Description ? help Back to Top
Source	Description
UniProt	Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00158	DAP	Transfer from AT1G22810	Download

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_019155541.1	1e-89	PREDICTED: ethylene-responsive transcription factor ERF020
Swissprot	O80542	2e-40	ERF19_ARATH; Ethylene-responsive transcription factor ERF019
TrEMBL	A0A1S3XV09	1e-51	A0A1S3XV09_TOBAC; ethylene-responsive transcription factor ERF020-like
TrEMBL	A0A1U7VLT9	1e-51	A0A1U7VLT9_NICSY; ethylene-responsive transcription factor ERF020-like
STRING	XP_009767328.1	2e-52	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA9494	20	28

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G22810.1	5e-29	ERF family protein

Publications ? help Back to Top
Scarpeci TE,Frea VS,Zanor MI,Valle EM Overexpression of AtERF019 delays plant growth and senescence, and improves drought tolerance in Arabidopsis. J. Exp. Bot., 2017. 68(3): p. 673-685 [PMID:28204526]