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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Itr_sc000249.1_g00010.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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| Family |
ERF |
| Protein Properties |
Length: 336aa MW: 37458.9 Da PI: 5.3475 |
| Description |
ERF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Itr_sc000249.1_g00010.1 | genome | Kazusa | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 56.3 | 8.1e-18 | 64 | 112 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
+ GVr+++ +gr++AeIrdp++ + r++lg+f+ta+eAa a+++a+++++g
Itr_sc000249.1_g00010.1 64 FLGVRRRP-WGRYAAEIRDPTT---KERHWLGTFDTAQEAALAYDRAALSMKG 112
56******.**********965...5************************998 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0010102 | Biological Process | lateral root morphogenesis |
| GO:0010432 | Biological Process | bract development |
| GO:0010451 | Biological Process | floral meristem growth |
| GO:0010582 | Biological Process | floral meristem determinacy |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 336 aa
Download sequence Send
to blast |
MSSSNTSPSQ QHHHHHQQQQ QQQPFSLFEP IRTPTGFSWL QRNTAVAQPS EKRGRRKQAE 60
PGRFLGVRRR PWGRYAAEIR DPTTKERHWL GTFDTAQEAA LAYDRAALSM KGAQARTNFI 120
YTTDSCYTTN TNNPFDLHPQ NSSYSSSPPF ILTCTPEKKP AAAPPPPVSS SPPLLGQSDN 180
ETCSQSSYGS SPQENSLFFS PHEEDNSGYL DCIVPDTILR PPNTTTTISQ ETNESGNYYT 240
TPQNLPWFWE GQQSWDMMNS CDDLSAILNN NNNNKSSMSY EVRNACMGME NDEKPAIIGS 300
FDKVMMMQGG GEGASSSTTT CSYAYGDAND YGYSLY
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| Functional Description ? help
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| Source |
Description |
| UniProt | Probably acts as a transcriptional activator. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). Involved in the control of cell division patterns during the early lateral root primordium development. Acts downstream of auxin signaling (PubMed:17630277). Regulated by ARF7 and ARF19 in response to auxin. Co-acts with LBD16 and LBD18 to control lateral root development (PubMed:23749813). Involved in the determination of floral meristem identity and suppression of bract growth. Required for proper conversion of secondary inflorescences to flowers. Acts together with NPR5/BOP2 and NPR6/BOP1 to promote expression of LFY and AP1, two central regulators of floral meristem identity (PubMed:19482972). {ECO:0000250|UniProtKB:Q9LND1, ECO:0000269|PubMed:17630277, ECO:0000269|PubMed:19482972, ECO:0000269|PubMed:23749813}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By auxin. {ECO:0000269|PubMed:17630277, ECO:0000269|PubMed:23749813}. |
