PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Itr_sc000157.1_g00004.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | NAC | ||||||||
Protein Properties | Length: 338aa MW: 38234.2 Da PI: 8.4475 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 159.8 | 1.1e-49 | 77 | 208 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkat 86 lppGfrFhPtdeel+++yL kkv+++ +++++i+e+diyk++Pw+Lp + + +ekew+fFs+rd+ky++g+r+nra++sgyWkat Itr_sc000157.1_g00004.1 77 LPPGFRFHPTDEELITCYLMKKVASSADPTASMIAEADIYKFNPWELPGRGYFGEKEWFFFSPRDRKYPNGHRPNRAAASGYWKAT 162 79*************************999999***************8778899******************************* PP NAM 87 gkdkevlsk....kgelvglkktLvfykgrapkgektdWvmheyrl 128 g+dk++ls+ +++ +g+kk Lvfy+gr +kg ktdW+m eyrl Itr_sc000157.1_g00004.1 163 GTDKPILSAttasSSRCIGVKKALVFYRGRPQKGIKTDWTMCEYRL 208 ********876666666***************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.31E-59 | 72 | 236 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 57.568 | 77 | 236 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.9E-25 | 78 | 208 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 338 aa Download sequence Send to blast |
MEGNQYANFL ANLRRVSSLG TMNIDEPPDD LKDLLDRPPG NKACRLGGLP IKPSLPQWEI 60 KGQDTLYFIM QDMTQSLPPG FRFHPTDEEL ITCYLMKKVA SSADPTASMI AEADIYKFNP 120 WELPGRGYFG EKEWFFFSPR DRKYPNGHRP NRAAASGYWK ATGTDKPILS ATTASSSRCI 180 GVKKALVFYR GRPQKGIKTD WTMCEYRLLN NAHQQAFRQK GSMRLDDWVL CRVRNKSNNI 240 AEGRFGNGKE DITEKINPSY DHHCYAGGSQ VLNGLEYFGH FQFQTGSSSN HSNPQTNIMG 300 GSVKEALENI KRVLLFEPCM YGQPQILNQD EPELNPTS |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 1e-63 | 76 | 238 | 14 | 170 | Stress-induced transcription factor NAC1 |
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Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor of the NAC family associated with male fertility. {ECO:0000250}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_019162164.1 | 1e-175 | PREDICTED: NAC transcription factor 56-like | ||||
Swissprot | A2YMR0 | 1e-69 | NAC10_ORYSI; NAC transcription factor ONAC010 | ||||
TrEMBL | A0A068TT87 | 1e-90 | A0A068TT87_COFCA; Uncharacterized protein | ||||
STRING | POPTR_0004s04920.1 | 6e-81 | (Populus trichocarpa) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA17425 | 3 | 4 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G04070.2 | 2e-70 | NAC domain containing protein 47 |