 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Han006483 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Heliantheae alliance; Heliantheae; Helianthus
|
| Family |
DBB |
| Protein Properties |
Length: 239aa MW: 27117 Da PI: 4.5825 |
| Description |
DBB family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| PUT-169a-Helianthus_annuus-53341 | PU_ref | plantGDB | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-B_box | 18.4 | 4.6e-06 | 4 | 34 | 5 | 35 |
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHk 35
+C+ ++e + +C+++ +lC +C H+
Han006483 4 NCDYCGEARSMVYCRSDAAYLCLSCDRDVHS 34
6*************************99995 PP
|
| 2 | zf-B_box | 27.1 | 8.9e-09 | 47 | 88 | 5 | 39 |
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg.......Htv 39
+C+ ++++++ Ced +q +C++C +H+g H++
Han006483 47 VCDVCNSQPAVVRCEDEKQSFCQNCDWVSHNGdnidastHNR 88
8*****************************997777777766 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 239 aa
Download sequence Send
to blast |
MGYNCDYCGE ARSMVYCRSD AAYLCLSCDR DVHSANPLSQ RHMRTLVCDV CNSQPAVVRC 60
EDEKQSFCQN CDWVSHNGDN IDASTHNRQT LNCYSGCPSA TELSSIWFFM SESCEQEMGS 120
MSIVDDNTQE PSGNSKIQDS SVNIEASKVV DDGLYDDYTM DEVDMNIENY EEMFGVGHND 180
PKHLFAKDGI DSLFGKKIKQ RSLQYGTTRC XHAPRWIIMS CKPNRPMYAL TVYIHFDLL
|
| Best hit in Arabidopsis thaliana ? help
Back to Top |
| Hit ID |
E-value |
Description |
| AT5G48250.1 | 4e-72 | B-box type zinc finger protein with CCT domain |
