PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Han005532
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Heliantheae alliance; Heliantheae; Helianthus
Family TCP
Protein Properties Length: 268aa    MW: 28837.3 Da    PI: 6.6395
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Han#S48346449PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP37.21.1e-112644889
        TCP 48 ieWLlqqakpaikeltgtssssasec.eaesssssasnsssg....................k 89
               ieWLlqqa+pai+++tgt++++a+++  ++s +ss+s+ s++                    +
  Han005532  2 IEWLLQQAEPAIIAATGTGTIPANFStLNVSLRSSGSTLSAPpsksaahqfhgalalahhpfE 64
               9**********************9998888888888855555555555555444444433331 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5136910.626116IPR017887Transcription factor TCP subgroup
PfamPF036343.7E-132115IPR005333Transcription factor, TCP
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    Send to blast
XIEWLLQQAE PAIIAATGTG TIPANFSTLN VSLRSSGSTL SAPPSKSAAH QFHGALALAH  60
HPFEEGFSQM LGFHHHQHHQ NPNILTADQL ADAISTGGDS TENFMRKRYR EDLFKDESNQ  120
NQGDGSQSPS NKSFKSGMEM GKPQEPGPSS GNNILRHHGS MMPATAMWAV APAPTTATGN  180
TLWMLPVSTS VTNSSSGPES QHQHQHQQQM WPFPTAQALG GGNTYKHHCI SSENQHPGGD  240
LDSNRIENNP LHSGLCNEPQ HSSNTPSS
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021988457.11e-137transcription factor TCP8
RefseqXP_021988458.11e-137transcription factor TCP8
TrEMBLA0A251TJU91e-136A0A251TJU9_HELAN; Putative TCP family transcription factor
STRINGEOX971601e-66(Theobroma cacao)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G58100.13e-40TCP family protein