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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Han002357 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Heliantheae alliance; Heliantheae; Helianthus
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Family |
NF-YA |
Protein Properties |
Length: 259aa MW: 28687.9 Da PI: 9.3056 |
Description |
NF-YA family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
gnl|UG|Han#S48343703 | PU_unref | Unigene | View CDS |
PUT-169a-Helianthus_annuus-15659 | PU_ref | plantGDB | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | CBFB_NFYA | 103.2 | 2.3e-32 | 128 | 183 | 2 | 58 |
CBFB_NFYA 2 eplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58
ep+YVNaKQy +Il+RRq+Rak+e ekkl +k rkpylheSRh+hA+rR RgsgGrF
Han002357 128 EPVYVNAKQYPAILRRRQSRAKAELEKKL-IKDRKPYLHESRHQHAMRRIRGSGGRF 183
8****************************.**************************9 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0016602 | Cellular Component | CCAAT-binding factor complex |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 259 aa
Download sequence Send
to blast |
MSTTAMRRNS SDSSSSEESL DKESQSDDVV SEEDDDVSKE TQNGPSFRSD SCGQEHKSCR 60 QQGLPNVLPS NGETLRQVPQ LELVGHSVAC APNPYYGGMM TAYGQPLVHP QFVDMQTRMP 120 LTLEMAPEPV YVNAKQYPAI LRRRQSRAKA ELEKKLIKDR KPYLHESRHQ HAMRRIRGSG 180 GRFAKKTEIE SLKNTTASGS PNSVKSKRVH SESAETPRVG SVLSQNYQAS SGYHLHSSDR 240 GKQWINISSN PAAQSAVAM
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Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Ubiquitous. {ECO:0000269|PubMed:11250072, ECO:0000269|PubMed:9662544}. |
Functional Description ? help
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Source |
Description |
UniProt | Stimulates the transcription of various genes by recognizing and binding to a CCAAT motif in promoters. {ECO:0000250}. |