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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Han000973 |
| Common Name | kn1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Heliantheae alliance; Heliantheae; Helianthus
|
| Family |
TALE |
| Protein Properties |
Length: 362aa MW: 40097 Da PI: 5.2485 |
| Description |
TALE family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| gnl|UG|Han#S18764409 | PU_ref | Unigene | View CDS |
| PUT-169a-Helianthus_annuus-25558 | PU_unref | plantGDB | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 28.7 | 2.3e-09 | 290 | 324 | 21 | 55 |
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS
Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRake 55
k +yps++++ LA+++gL+++q+ +WF N+R ++
Han000973 290 KWPYPSEAQKLALAESTGLDQKQINNWFINQRKRH 324
569*****************************885 PP
|
| 2 | ELK | 41.1 | 3.7e-14 | 244 | 265 | 1 | 22 |
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22
ELK qLlrKYsgyLgsLkqEF+
Han000973 244 ELKGQLLRKYSGYLGSLKQEFM 265
9********************8 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 362 aa
Download sequence Send
to blast |
MESDGDGGGT SSCLMSFGDT TNNINNNSSN NNNSNNNIGS LCLPPNPPGA YNTTTNNNNL 60
IFSDHHPSAM MLEDNNININ DGVGLAFMNP SSSVKAKIMS HPHYPRLLSA YLNCQKIGAP 120
PEVVERLEEA CRASVVAAMS SCSGGAGTSD GSGGGMNMII GQDPALDQFM EAYCEMLIKY 180
EQELSKPFKE AMLFLSRIES QFKAISISTS DSAGGEGGMD KNGSSEEEVD VNNNLIDPQA 240
EDRELKGQLL RKYSGYLGSL KQEFMKKRKK GKLPKEARQQ LLDWWTRHYK WPYPSEAQKL 300
ALAESTGLDQ KQINNWFINQ RKRHWKPSED MQFVVMDAAH PHYFMENMNI LGNPYPMDVS 360
LL
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 259 | 268 | LKQEFMKKRK |
| 2 | 265 | 269 | KKRKK |
| Expression --
Description ? help
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| Source |
Description |
| Uniprot | DEVELOPMENTAL STAGE: First expressed in the embryo proliferation stage, increases during early somatic embryo development and decreases thereafter. |
| Uniprot | TISSUE SPECIFICITY: Expressed mainly in embryonic tissues. Weakly detected in stems and hypocotyl. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Possible transcription activator involved in early embryonic development. Probably binds to the DNA sequence 5'-TGAC-3'. |
