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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
HL.SW.v1.0.G044638.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Humulus
|
| Family |
GATA |
| Protein Properties |
Length: 333aa MW: 36935.9 Da PI: 9.1592 |
| Description |
GATA family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| HL.SW.v1.0.G044638.1 | genome | HOPBASE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GATA | 60.4 | 2.3e-19 | 238 | 271 | 1 | 34 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34
C++C +t+Tp+WR+gp g+ktLCnaCG++yr+ +
HL.SW.v1.0.G044638.1 238 CTHCEVTNTPQWREGPLGPKTLCNACGVRYRSGR 271
*******************************987 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0008270 | Molecular Function | zinc ion binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 333 aa
Download sequence Send
to blast |
MFKKLDCDEG PKDFDGPKDL PKDIFEMLNF PLEDVEQDID KDDWNDIPLP DLPLDYCVGF 60
TNGLVGVYQN DCSKPNKILP TPYEKACRLK QIPSAAAEST IKTSSAGGKL LSHDSSDVKN 120
VRLFKTSSPV SILESTSSCF TENQMPVDKK FIVPKKRARS KRTRSSNVNK LRSLSFLSST 180
SSSFESLCLE SDSGTVDDGK MFKQSVKKPV RKGKIAFNIP GTETKNFNSQ EQNTTKKCTH 240
CEVTNTPQWR EGPLGPKTLC NACGVRYRSG RLFPEYRPAA SPTFIPSVHS NSHKKVIEMR 300
NKGNQGTKNS SRASVELYCC SQPGNSVRHV FV*
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