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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
HL.SW.v1.0.G037204.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Humulus
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| Family |
GATA |
| Protein Properties |
Length: 279aa MW: 30977.2 Da PI: 9.3442 |
| Description |
GATA family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| HL.SW.v1.0.G037204.1 | genome | HOPBASE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GATA | 55.9 | 5.6e-18 | 213 | 247 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
Cs+C + kTp+WR gp g+ktLCnaCG++y++ +l
HL.SW.v1.0.G037204.1 213 CSHCLSQKTPQWRAGPLGPKTLCNACGVRYKSGRL 247
*******************************9986 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0008270 | Molecular Function | zinc ion binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 279 aa
Download sequence Send
to blast |
MDICRNVSLG GEYEKEEHNL SLSPPSSDHY SSSSGLDQLF SSQTVEEDLS LEWLSVFVED 60
CLTSSGNCLP LPPLPNTTSS STTTNITSTC TNVLQTPKPS KPLEFHKDQK KPTSLETFSV 120
PSKARSKRKR AVLTKRRDPL TIWSSQQMAK KTTTTTTSYY DYPPLLQQAY WLADSELIVP 180
KKEVGKEKVK ENGDLVKEQP LGLVAHGLVA RRCSHCLSQK TPQWRAGPLG PKTLCNACGV 240
RYKSGRLLPE YRPAKSPTFV SYLHSNSHKK VMEMRNGS*
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