PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID HL.SW.v1.0.G034327.1
Organism
Humulus lupulus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Humulus
Family bZIP
Protein Properties Length: 420aa    MW: 45586.8 Da    PI: 6.5269
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
HL.SW.v1.0.G034327.1genomeHOPBASEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.83.1e-10183223545
                           CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 
                           k  rr+++NReAAr+sR+RKka++++Le    +L++  ++L
  HL.SW.v1.0.G034327.1 183 KTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQEL 223
                           788*************************9777777666555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003385.9E-9179242IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.415181225IPR004827Basic-leucine zipper domain
SuperFamilySSF579596.19E-7183226No hitNo description
CDDcd147088.37E-23183235No hitNo description
PfamPF001702.4E-7183223IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.4E-7184227No hitNo description
PROSITE patternPS000360186201IPR004827Basic-leucine zipper domain
PfamPF141443.3E-31265340IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 420 aa     Download sequence    Send to blast
MGSRTVKIGA HDGNKVVNEM PSYVPPVSSS NPIGTEGSTI RSSRISDFGT LEQSLGFRLE  60
DAVDISRNPV FNQLKSGSSA LGNDVQLDVI SKSLALSDAN LSSAILGSQA LSLPKDSQTK  120
LASVSGSHRE NWGESSMAEG SPRTDTSTDD TDDKNQRHER NQLTAVGASD SSDKSKEKAG  180
DQKTLRRLAQ NREAARKSRL RKKAYVQQLE SSRLKLTQLE QELQRARQQG IFISSSGDQS  240
HSMSGNGALA FDVEYARWLE EHNRQINELR AAVNSHAGDG ELRTIIENVT AHFDDIFRLK  300
GIAAKADVFH ILSGMWKTPA ERCFMWIGGF RSSELLKLLV SQLEPLTEQQ LMGICNLQQS  360
SQQAEDALSQ GMEALQQSLA ETLANGSPGP SGASGNVANY MGQMAMAMGK LGTLEGFLRQ
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015866376.10.0transcription factor HBP-1b(c38)-like isoform X1
SwissprotO241600.0TGA21_TOBAC; TGACG-sequence-specific DNA-binding protein TGA-2.1
TrEMBLA0A2P5BIP10.0A0A2P5BIP1_TREOI; Basic-leucine zipper transcription factor
STRINGEMJ050740.0(Prunus persica)
STRINGcassava4.1_008329m0.0(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF14703494
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06950.41e-114bZIP family protein