PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID HL.SW.v1.0.G032932.1
Organism
Humulus lupulus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Humulus
Family BES1
Protein Properties Length: 338aa    MW: 36174.5 Da    PI: 8.3202
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
HL.SW.v1.0.G032932.1genomeHOPBASEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822210.64.1e-6521461150
                DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasas 89 
                           ++++r ptwkErEnnkrRERrRRaiaaki++GLR++Gnyklpk++DnneVlkALc+eAGw+ve DGttyrkg+kp e+++++g sa +s
  HL.SW.v1.0.G032932.1   2 TSGTRLPTWKERENNKRRERRRRAIAAKIFSGLRMYGNYKLPKHCDNNEVLKALCNEAGWTVELDGTTYRKGCKPAERMDVMGGSAATS 90 
                           5899************************************************************************************* PP

                DUF822  90 pesslqsslkssalaspvesysaspksssfpspssldsislasa...asllpvlsvlslvsssl 150
                           p+ss++        +sp +sy++sp sssfpsp+s++ + ++ +   +sl+p+l++ls++sss+
  HL.SW.v1.0.G032932.1  91 PCSSYH--------PSPYASYNPSPGSSSFPSPASSSYAAANPNgegNSLIPWLKNLSSASSSA 146
                           ******........*******************99888776655788**********9987765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056875.3E-653140IPR008540BES1/BZR1 plant transcription factor, N-terminal
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    Send to blast
MTSGTRLPTW KERENNKRRE RRRRAIAAKI FSGLRMYGNY KLPKHCDNNE VLKALCNEAG  60
WTVELDGTTY RKGCKPAERM DVMGGSAATS PCSSYHPSPY ASYNPSPGSS SFPSPASSSY  120
AAANPNGEGN SLIPWLKNLS SASSSASSSK LPHLYNHGGS ISAPVTPPLS SPTARTPRIK  180
TDWEANLTRP PWGGQLCSFQ PSSMPPSPGR QIVDPEWFSG IRIPQGGPHS PTFSLVAANP  240
FGSKEEVMAC GGSRMCTPGQ SGTCSPAIAA GSDHNADIPM AEVIYDEFAF GGHMTGLVKP  300
WEGERIHEEC GVDDLELTLG SSKTSGDVIF VPRRQNL*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A2e-22676372442Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B2e-22676372442Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C2e-22676372442Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D2e-22676372442Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024019453.11e-176BES1/BZR1 homolog protein 4
RefseqXP_024019454.11e-176BES1/BZR1 homolog protein 4
SwissprotQ9ZV881e-128BEH4_ARATH; BES1/BZR1 homolog protein 4
TrEMBLA0A2P5D9B01e-168A0A2P5D9B0_PARAD; BES1/BZR1 transcription factor
STRINGEOY133911e-163(Theobroma cacao)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF26613375
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.11e-105BES1/BZR1 homolog 4