PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Humulus

Family

G2-like

Protein Properties

Length: 424aa MW: 47600.2 Da PI: 8.2501

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
HL.SW.v1.0.G029945.1	genome	HOPBASE	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.1	7.5e-32	75	128	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtp+LH rFv+ave+LGG+e+AtPk +l+lm++kgL+++hvkSHLQ+YR+ HL.SW.v1.0.G029945.1 75 PRLRWTPDLHLRFVHAVERLGGQERATPKLVLQLMSIKGLSIAHVKSHLQMYRS 128 8****************************************************7 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	1.0E-29	71	129	IPR009057	Homeodomain-like
PROSITE profile	PS51294	12.282	71	131	IPR017930	Myb domain
SuperFamily	SSF46689	1.97E-14	73	129	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	1.4E-22	75	130	IPR006447	Myb domain, plants
Pfam	PF00249	1.0E-8	76	127	IPR001005	SANT/Myb domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 424 aa Download sequence Send to blast
MINMVVESRT SDSECSKTSF EYEDESGEEN EDESTKPNNK DTNNGGLSSS NSTVEESDKV 60 KSSSSVRPYV RSKMPRLRWT PDLHLRFVHA VERLGGQERA TPKLVLQLMS IKGLSIAHVK 120 SHLQMYRSKK IDDAGQVIGS HDHHHRHLLD CGDRNIFNLS QLPMLQGYKQ TSHSSNFRYG 180 FDDPSWTSFG NLRHSRAGFY ALSAEAERKI LASNWGSSTN ACNFPSKNNI SSTISSNLIN 240 HDQHSSWRKA HNKLTIKDND HDHHNNHLQH RPSSTPHQTQ FNTPLIDLNS IAHLQVNKAK 300 ELTNFLSSNN NVTHSDTVLN TTTTTTSTST SMKRKASSDS NNHHHHHQLD LDLSLRLTTT 360 SSDVVMDIDR DHKRKRSSGD EVDSSLLSLS LNSSNSSSKR SKNDDHHHGE MQARRASTLD 420 LTI*

Sequence ? help Back to Top

Protein Sequence Length: 424 aa Download sequence Send to blast

MINMVVESRT SDSECSKTSF EYEDESGEEN EDESTKPNNK DTNNGGLSSS NSTVEESDKV  60
KSSSSVRPYV RSKMPRLRWT PDLHLRFVHA VERLGGQERA TPKLVLQLMS IKGLSIAHVK  120
SHLQMYRSKK IDDAGQVIGS HDHHHRHLLD CGDRNIFNLS QLPMLQGYKQ TSHSSNFRYG  180
FDDPSWTSFG NLRHSRAGFY ALSAEAERKI LASNWGSSTN ACNFPSKNNI SSTISSNLIN  240
HDQHSSWRKA HNKLTIKDND HDHHNNHLQH RPSSTPHQTQ FNTPLIDLNS IAHLQVNKAK  300
ELTNFLSSNN NVTHSDTVLN TTTTTTSTST SMKRKASSDS NNHHHHHQLD LDLSLRLTTT  360
SSDVVMDIDR DHKRKRSSGD EVDSSLLSLS LNSSNSSSKR SKNDDHHHGE MQARRASTLD  420
LTI*

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4k_A	2e-17	76	130	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B	2e-17	76	130	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A	2e-17	76	130	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C	2e-17	76	130	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D	2e-17	76	130	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F	2e-17	76	130	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H	2e-17	76	130	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J	2e-17	76	130	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00297	DAP	Transfer from AT2G38300	Download

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010092813.1	1e-110	two-component response regulator ORR22
TrEMBL	W9R2E6	1e-109	W9R2E6_9ROSA; Putative Myb family transcription factor
STRING	XP_010092813.1	1e-110	(Morus notabilis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF2378	34	82

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	2e-52	G2-like family protein