PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID HL.SW.v1.0.G022757.1
Organism
Humulus lupulus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Humulus
Family bZIP
Protein Properties Length: 261aa    MW: 29964.7 Da    PI: 5.7089
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
HL.SW.v1.0.G022757.1genomeHOPBASEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_149.97.1e-16103161563
                           CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                           +r+rr+++NRe+ArrsR RK++ ++eL   v  L +eN++L+++l++ ++  +++ +e+
  HL.SW.v1.0.G022757.1 103 RRQRRMISNRESARRSRMRKQKHLDELWSQVVRLRTENHSLIDKLNHVSESHDRVLQEN 161
                           79***********************************************9999988887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.2E-1699163IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.07101164IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.1E-13103177No hitNo description
PfamPF001701.5E-13103161IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.5E-13103153No hitNo description
CDDcd147023.54E-21104155No hitNo description
PROSITE patternPS000360106121IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0042803Molecular Functionprotein homodimerization activity
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    Send to blast
MLPGEFTELY YLPVSPDHHQ NPILPVLPNF NNTMITNSTC TSNMDPVFHL NSSFLNTNLP  60
HYPPPQTTSS TLSNNSTSDE AEENYNNIHS PHDHEQMRII DERRQRRMIS NRESARRSRM  120
RKQKHLDELW SQVVRLRTEN HSLIDKLNHV SESHDRVLQE NSRLKEEASD LRQMLTALQI  180
GSPYNAAVLR TTIHDDDDDD DDGVDADDHD RDLEDMVDNI DRSHRNHNHH HNEINLPCNA  240
AHLRAGTSST NIATSVDLLH *
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1115122RRSRMRKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021634785.12e-65basic leucine zipper 43-like
TrEMBLA0A2P5DMW31e-93A0A2P5DMW3_PARAD; Basic-leucine zipper transcription factor
STRINGcassava4.1_022183m8e-65(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF16043399
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G13600.11e-43basic leucine-zipper 58