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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
HL.SW.v1.0.G018770.1 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Humulus
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| Family |
NF-YA |
| Protein Properties |
Length: 352aa MW: 38511.8 Da PI: 8.4946 |
| Description |
NF-YA family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| HL.SW.v1.0.G018770.1 | genome | HOPBASE | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | CBFB_NFYA | 104 | 1.4e-32 | 174 | 230 | 1 | 58 |
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58
+ep+YVNaKQy++Il+RRq+Rak+e ekkl +k rkpylheSRh hA+rR+Rg+gGrF
HL.SW.v1.0.G018770.1 174 EEPVYVNAKQYHGILRRRQSRAKAELEKKL-IKVRKPYLHESRHLHAMRRARGTGGRF 230
69****************************.**************************9 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0016602 | Cellular Component | CCAAT-binding factor complex |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 352 aa
Download sequence Send
to blast |
MHQKLNGSSN HMESDANSTE NLQSTIGNSQ PWWGSGIGHQ AISKGLFGGT SMTLSPPKTL 60
NGDLGIQTTN SSPQANQGKP DEGDHGHHRQ DLVQSDGKCE EEQQVSSISP PAMNEYLAPH 120
TQLELSSHSI GCGSYSYSDP YLRGVVPFGS HTLVQAHCLG MPSSRMALPL DMAEEPVYVN 180
AKQYHGILRR RQSRAKAELE KKLIKVRKPY LHESRHLHAM RRARGTGGRF LNTKKTNHTA 240
HNTTPDMNTT TSSAATSTDP IISLSTKPVS SESSSGHCES TELHMQKMHQ AKTYHPNVNG 300
NSCYLPHQGF QLSAYHSLSG DHRIEEGDLI SGQHRDRIMT NGTSHRALTI K*
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