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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
HL.SW.v1.0.G010396.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Humulus
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| Family |
GATA |
| Protein Properties |
Length: 288aa MW: 32121 Da PI: 7.954 |
| Description |
GATA family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| HL.SW.v1.0.G010396.1 | genome | HOPBASE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GATA | 63.3 | 2.9e-20 | 155 | 189 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
C+nC tt+TplWR+gp+g+k+LCnaCG++++k+++
HL.SW.v1.0.G010396.1 155 CANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEER 189
********************************986 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0009793 | Biological Process | embryo development ending in seed dormancy |
| GO:0009909 | Biological Process | regulation of flower development |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0008270 | Molecular Function | zinc ion binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 288 aa
Download sequence Send
to blast |
MMHRCSSSQG NMVGPCSCGL YHSQSNSFSV LFSMPNHKPY DHYDQSHQHQ HHDMYSFASP 60
SSSVDCTLSL GTPSTRLSTT EDYYDDNSNS SNNNNKHQRM RHSERRNDSC VSNFCWDLLQ 120
PNKQQTTSSH KNSGRSSSNS SNSAAANDPL LARRCANCDT TSTPLWRNGP RGPKSLCNAC 180
GIRFKKEERR AAATSTANGA TSGVVIEPSH MFSHHNNPWS NINHHHQYQH SQAQKMPCLS 240
PAAAMGNEFR FMDDENHEPA ADSNGISFLS WRLNVTDRPS LVHDFTR*
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