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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
HL.SW.v1.0.G009614.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Humulus
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Family |
GATA |
Protein Properties |
Length: 344aa MW: 37370.5 Da PI: 4.9534 |
Description |
GATA family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
HL.SW.v1.0.G009614.1 | genome | HOPBASE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GATA | 55.8 | 6.2e-18 | 260 | 293 | 1 | 34 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34
Cs+C + kTp+WR gp g+ktLCnaCG+++++ +
HL.SW.v1.0.G009614.1 260 CSHCLVQKTPQWRTGPLGPKTLCNACGVRFKSGR 293
*******************************987 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0008270 | Molecular Function | zinc ion binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 344 aa
Download sequence Send
to blast |
MEGMEAKALR PSLRGELAQF ELFEEIYCST TNINNGAGLS CVPSEDFSID DLLNLQNGEF 60 EDGSVEEEEE EEEKYSLCVD EESLNVSGGY TGAGDSESAL TSELAVPDDD LAELEWVSHF 120 VDDSFSDFSL LHPIGKQRTE LHSENRFEQP EPTRTGTSPT CFPSVPVKTR TKRARPTTQS 180 WSRSNSLSPL TESSTSSSSS VASSPSSASF SSTPCLIFTN TVQAVEFLPS LSEPASKKQK 240 KKPAVQTGAA PVGPQFQRRC SHCLVQKTPQ WRTGPLGPKT LCNACGVRFK SGRLFPEYRP 300 ACSPTFSSEV HSNSHRKVLE MRKKKEVVGP GPGSGLTHVI SSF*
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