 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
HL.SW.v1.0.G008324.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Humulus
|
| Family |
GATA |
| Protein Properties |
Length: 327aa MW: 35573.2 Da PI: 4.9447 |
| Description |
GATA family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| HL.SW.v1.0.G008324.1 | genome | HOPBASE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GATA | 58 | 1.3e-18 | 243 | 277 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
Cs+Cg+ kTp+WR gp g ktLCnaCG+++++ +l
HL.SW.v1.0.G008324.1 243 CSHCGVQKTPQWRTGPLGAKTLCNACGVRFKSGRL 277
*******************************9986 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0008270 | Molecular Function | zinc ion binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 327 aa
Download sequence Send
to blast |
MECVEAAFKT SFEENGVTTD DFFVDDLLNF SNEDGFVEEE EPEEEEDKGF ASVSPSQNQN 60
QNQNQTEAEL DNSNPTSTSF SPKHEFGPVP ATTELSVPVD ELANLEWLSH FVEDSFSEFS 120
TPYLAGVSAE KPKNQTEEVS EPKKLTLPEQ PCFSTPVPAK ARSKRARTGG RVWSLGSPSL 180
TESSSSSTSS SSSSSLSSPW LLYQTLSQDP AGSVEKPPAK KAKKKSTQTD ATGSLTGQPS 240
RRCSHCGVQK TPQWRTGPLG AKTLCNACGV RFKSGRLLPE YRPACSPTFS SELHSNHHRK 300
VLEMRRKKED VPVAESGFAP PVVPSF*
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. May be involved in the regulation of some light-responsive genes (By similarity). {ECO:0000250}. |
