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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Gorai.012G014500.3 |
Common Name | B456_012G014500, LOC105780548 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family |
bZIP |
Protein Properties |
Length: 342aa MW: 37432.8 Da PI: 5.6529 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Gorai.012G014500.3 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 32.3 | 2.2e-10 | 153 | 202 | 5 | 54 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54
kr++r + NR +A+rs ++K ++ eLe+kv++L++e ++L l +
Gorai.012G014500.3 153 KRAKRIIANRRSATRSKEKKALYMSELERKVQTLQTEATTLSAHLTLFQR 202
9****************************************988876665 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 342 aa
Download sequence Send
to blast |
MQDPRNLNPN PDPAFPSFTQ NMPSFSNPAQ YRGSYHRRAQ SEVQFRIPDD LDLVSDPFEG 60 LGSEDDMLCS YMDIEMPGES AKGVEAAAGS WSQNPKGEEV SGGSGIGEKY NGGGKGRHRY 120 SNSVDGCSIM ESIEAKKAMA PDKLAELWTI DPKRAKRIIA NRRSATRSKE KKALYMSELE 180 RKVQTLQTEA TTLSAHLTLF QRDTTGLTTE NAELKLRLQA MEQQAQLSDA LNEALKKEVE 240 RLKTATGEIT TPTDTFNLGM HHISYAQSSF FPPQNTQLPP FHPFHSNLLT SSLNTNSHAL 300 ADMMQQDPLG LLQGLDTSSR GSPFVKSESP SICAAESSGT V*
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Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Ubiquitous. Strongly expressed in mature pollen. {ECO:0000269|PubMed:27896439}. |
Functional Description ? help
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Source |
Description |
UniProt | Transcrition factor that may participate with bZIP34 in the gametophytic control of pollen development. {ECO:0000269|PubMed:27896439}. |
Publications
? help Back to Top |
- Duarte JM, et al.
Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. Mol. Biol. Evol., 2006. 23(2): p. 469-78 [PMID:16280546] - Paterson AH, et al.
Repeated polyploidization of Gossypium genomes and the evolution of spinnable cotton fibres. Nature, 2012. 492(7429): p. 423-7 [PMID:23257886] - Pawar V, et al.
A novel family of plant nuclear envelope-associated proteins. J. Exp. Bot., 2016. 67(19): p. 5699-5710 [PMID:27630107] - Gibalová A, et al.
Characterization of pollen-expressed bZIP protein interactions and the role of ATbZIP18 in the male gametophyte. Plant Reprod, 2017. 30(1): p. 1-17 [PMID:27896439] - Ezer D, et al.
The G-Box Transcriptional Regulatory Code in Arabidopsis. Plant Physiol., 2017. 175(2): p. 628-640 [PMID:28864470] - Babiychuk E,Fuangthong M,Van Montagu M,Inzé D,Kushnir S
Efficient gene tagging in Arabidopsis thaliana using a gene trap approach. Proc. Natl. Acad. Sci. U.S.A., 1997. 94(23): p. 12722-7 [PMID:9356517]
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