 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Gorai.009G421200.5 |
| Common Name | B456_009G421200 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
|
| Family |
WRKY |
| Protein Properties |
Length: 422aa MW: 46412.9 Da PI: 9.1722 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Gorai.009G421200.5 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 105.4 | 3e-33 | 194 | 250 | 3 | 60 |
-SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60
DgynWrKYGqK+vkgse+prsYY+Ct+++Cpvkkkvers d+++ ei+Y+geHnh+k
Gorai.009G421200.5 194 DGYNWRKYGQKQVKGSEYPRSYYKCTHPNCPVKKKVERSL-DGQIAEIVYKGEHNHPK 250
9***************************************.***************85 PP
|
| 2 | WRKY | 33.6 | 7.5e-11 | 384 | 404 | 2 | 22 |
--SS-EEEEEEE--TT-SS-E CS
WRKY 2 dDgynWrKYGqKevkgsefpr 22
Dg++WrKYGqK+vkg+++pr
Gorai.009G421200.5 384 GDGFRWRKYGQKVVKGNPYPR 404
6*******************9 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0009957 | Biological Process | epidermal cell fate specification |
| GO:0010214 | Biological Process | seed coat development |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 422 aa
Download sequence Send
to blast |
MEVKEAERIV IAKPVASRPT CSSFKSFSEL LAGAINAAPP NACSANIVPA IRPKTVRFKP 60
VVNRAPSAMV SSQAEQSRIG ISISSDKVSK SDVKPTVVYK PQAKLVSKTT VSLLANMGNF 120
SASNQQRLQS MEAPVEYANW EKMRAQVRPN HHQNAPSQAE TDQTSEPSKV GSQNMEEDPK 180
VLPAVANSDR PSYDGYNWRK YGQKQVKGSE YPRSYYKCTH PNCPVKKKVE RSLDGQIAEI 240
VYKGEHNHPK PQPPKRNSSQ GLGVTSDGTG QDANNSLWSN NHNERNEGSE TRAENHSEVG 300
LSVLPAYQVK ALAPYEHVTT GGTSENSAGL SGECEEASKE GADVESKSKR RKNENQSSEV 360
GTLGECIQEP RVVVQSCTDS EIMGDGFRWR KYGQKVVKGN PYPRLKFSFV EVIHHIYIYI 420
Y*
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | KF669852 | 0.0 | KF669852.1 Gossypium hirsutum WRKY transcription factor 97 (WRKY97) mRNA, complete cds. |
