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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Gorai.009G086200.3 |
| Common Name | B456_009G086200 |
| Organism |
|
| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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| Family |
bZIP |
| Protein Properties |
Length: 492aa MW: 54888.6 Da PI: 6.7986 |
| Description |
bZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Gorai.009G086200.3 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | bZIP_1 | 34.8 | 3.6e-11 | 183 | 219 | 2 | 38 |
XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeL 38
++ k rr+++NReAAr+sR+RKka++++Le +L
Gorai.009G086200.3 183 PDAKTLRRLAQNREAARKSRLRKKAYVQQLESSRIKL 219
678999************************9754444 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 492 aa
Download sequence Send
to blast |
MENHRVGETG LTDSGPSSNY HHHAVLHGMN APISSNFIHQ NGSAFGFGEL EEAIVPHGVE 60
LTNDEAKAPA LFTRSRPSSA TLAMLPSNWS LRFQQTPRVE SWNSRGESTD SVSSSAVNTL 120
PSNQLQPESP ISQKESSSAD HHQPFNHKPL QQQQLEMASD ISSLNQSAAQ EKGRGSSSSE 180
KQPDAKTLRR LAQNREAARK SRLRKKAYVQ QLESSRIKLA QLEQDLQRTR SQGFFVGGCA 240
AAFGNISSGA AMFDMEYSRW LEDDHRHLSE LRTRLHAHLS DTDLQTIVDG YISHYDKIFR 300
LKEAAAKSDV LHLITGMWMT PVERCFVWIG DFRPSELIKM LVSQLDPLTE HQVMGICNLQ 360
HSSQQAEEAL TLGLEQLYHS LMDSIASGPV IHEMQQMAVA LSKLANLEGF LHQADNLRQQ 420
ILHQLPRILT VRQTARCFLV IGGYNQRLRA LSSLWASHGP PEVLISDDQS CQTTDLQMVM 480
VQQSQNHFSN F*
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| Expression --
Description ? help
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| Source |
Description |
| Uniprot | DEVELOPMENTAL STAGE: During anther development, accumulates in anther primordia during archesporial cell specification and later present in a horseshoe pattern associated with the lateral and adaxial portion of primordia, prior to the emergence of distinct locules. Expressed throughout sporogenic tissue and surrounding cells layers in adaxial and adaxial locules. Localized to the tapetum and middle layers, gradually fading postmeiosis with degeneration of these cell layers. {ECO:0000269|PubMed:20805327}. |
| Uniprot | TISSUE SPECIFICITY: Mostly expressed in stems, inflorescence apex and flowers, and, to a lower extent, in seedlings, leaves and siliques. {ECO:0000269|PubMed:20805327}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Together with TGA10, basic leucine-zipper transcription factor required for anther development, probably via the activation of SPL expression in anthers and via the regulation of genes with functions in early and middle tapetal development (PubMed:20805327). Required for signaling responses to pathogen-associated molecular patterns (PAMPs) such as flg22 that involves chloroplastic reactive oxygen species (ROS) production and subsequent expression of H(2)O(2)-responsive genes (PubMed:27717447). {ECO:0000269|PubMed:20805327, ECO:0000269|PubMed:27717447}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced by flg22 in leaves. {ECO:0000269|PubMed:27717447}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | JX581673 | 3e-38 | JX581673.1 Gossypium hirsutum clone NBRI_GE14350 microsatellite sequence. |
| Publications
? help Back to Top |
- Paterson AH, et al.
Repeated polyploidization of Gossypium genomes and the evolution of spinnable cotton fibres.
Nature, 2012. 492(7429): p. 423-7
[PMID:23257886] - Gutsche N,Zachgo S
The N-Terminus of the Floral Arabidopsis TGA Transcription Factor PERIANTHIA Mediates Redox-Sensitive DNA-Binding.
PLoS ONE, 2016. 11(4): p. e0153810
[PMID:27128442] - Noshi M,Mori D,Tanabe N,Maruta T,Shigeoka S
Arabidopsis clade IV TGA transcription factors, TGA10 and TGA9, are involved in ROS-mediated responses to bacterial PAMP flg22.
Plant Sci., 2016. 252: p. 12-21
[PMID:27717447] - Ezer D, et al.
The G-Box Transcriptional Regulatory Code in Arabidopsis.
Plant Physiol., 2017. 175(2): p. 628-640
[PMID:28864470]
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