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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Gorai.009G086200.1 |
| Common Name | B456_009G086200, LOC105767455 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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| Family |
bZIP |
| Protein Properties |
Length: 510aa MW: 57012.8 Da PI: 6.7497 |
| Description |
bZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Gorai.009G086200.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | bZIP_1 | 34.7 | 3.8e-11 | 201 | 237 | 2 | 38 |
XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeL 38
++ k rr+++NReAAr+sR+RKka++++Le +L
Gorai.009G086200.1 201 PDAKTLRRLAQNREAARKSRLRKKAYVQQLESSRIKL 237
678999************************9754444 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 510 aa
Download sequence Send
to blast |
MENHRVGETG LTDSGPSSNY HHHAVLHGMN APISSNFIHQ NGSAFGFGEL EEAIVPHGVE 60
LTNDEAKAPA LFTRSRPSSA TLAMLPSNWS LRFQQTPRES WNSRGESTDS VSSSAVNTLP 120
SNQLQPESPI SQKESSSADH HQPFNHKPLQ QQQLEMASDI SSLNQSAAQE KLQEQESHNN 180
QQSATLPRNF GRGSSSSEKQ PDAKTLRRLA QNREAARKSR LRKKAYVQQL ESSRIKLAQL 240
EQDLQRTRSQ GFFVGGCAAA FGNISSGAAM FDMEYSRWLE DDHRHLSELR TRLHAHLSDT 300
DLQTIVDGYI SHYDKIFRLK EAAAKSDVLH LITGMWMTPV ERCFVWIGDF RPSELIKMLV 360
SQLDPLTEHQ VMGICNLQHS SQQAEEALTL GLEQLYHSLM DSIASGPVIH EMQQMAVALS 420
KLANLEGFLH QADNLRQQIL HQLPRILTVR QTARCFLVIG GYNQRLRALS SLWASHGPPE 480
VLISDDQSCQ TTDLQMVMVQ QSQNHFSNF*
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| Expression --
Description ? help
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| Source |
Description |
| Uniprot | DEVELOPMENTAL STAGE: During anther development, accumulates in anther primordia during archesporial cell specification and later present in a horseshoe pattern associated with the lateral and adaxial portion of primordia, prior to the emergence of distinct locules. Expressed throughout sporogenic tissue and surrounding cells layers in adaxial and adaxial locules. Localized to the tapetum and middle layers, gradually fading postmeiosis with degeneration of these cell layers. {ECO:0000269|PubMed:20805327}. |
| Uniprot | TISSUE SPECIFICITY: Mostly expressed in stems, inflorescence apex and flowers, and, to a lower extent, in seedlings, leaves and siliques. {ECO:0000269|PubMed:20805327}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Together with TGA10, basic leucine-zipper transcription factor required for anther development, probably via the activation of SPL expression in anthers and via the regulation of genes with functions in early and middle tapetal development (PubMed:20805327). Required for signaling responses to pathogen-associated molecular patterns (PAMPs) such as flg22 that involves chloroplastic reactive oxygen species (ROS) production and subsequent expression of H(2)O(2)-responsive genes (PubMed:27717447). {ECO:0000269|PubMed:20805327, ECO:0000269|PubMed:27717447}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced by flg22 in leaves. {ECO:0000269|PubMed:27717447}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | JX581673 | 2e-36 | JX581673.1 Gossypium hirsutum clone NBRI_GE14350 microsatellite sequence. |
| Publications
? help Back to Top |
- Paterson AH, et al.
Repeated polyploidization of Gossypium genomes and the evolution of spinnable cotton fibres.
Nature, 2012. 492(7429): p. 423-7
[PMID:23257886] - Gutsche N,Zachgo S
The N-Terminus of the Floral Arabidopsis TGA Transcription Factor PERIANTHIA Mediates Redox-Sensitive DNA-Binding.
PLoS ONE, 2016. 11(4): p. e0153810
[PMID:27128442] - Noshi M,Mori D,Tanabe N,Maruta T,Shigeoka S
Arabidopsis clade IV TGA transcription factors, TGA10 and TGA9, are involved in ROS-mediated responses to bacterial PAMP flg22.
Plant Sci., 2016. 252: p. 12-21
[PMID:27717447] - Ezer D, et al.
The G-Box Transcriptional Regulatory Code in Arabidopsis.
Plant Physiol., 2017. 175(2): p. 628-640
[PMID:28864470]
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