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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Gorai.006G236200.1 |
Common Name | B456_006G236200, LOC105800494 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family |
GRAS |
Protein Properties |
Length: 759aa MW: 82340.7 Da PI: 6.1254 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Gorai.006G236200.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 421.2 | 8.5e-129 | 388 | 746 | 2 | 374 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilk 92
+lLl+cAeavs++++e a+++L +ls+l++p g++ qR+aayf eA++arl++s+ +++ lp+ + s ++++ ++a+++f+ +sP++k
Gorai.006G236200.1 388 LTLLLQCAEAVSANNFEDANRMLLELSQLSTPFGTSAQRVAAYFSEAISARLVSSCLGICGGLPSIPPS--HTQKMVSAFQVFNGISPFVK 476
579************************************************************999887..5899999************* PP
GRAS 93 fshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlva 183
fsh+taNqaI ea+e+eervHiiD+di+qGlQWp L++ LasRp+gpp++R+Tg+g s e+le+tg+rL++fA++lg+pfef + va
Gorai.006G236200.1 477 FSHFTANQAIQEAFEREERVHIIDLDIMQGLQWPGLFHILASRPGGPPHVRLTGLGT----SLEALEATGKRLSDFADKLGIPFEFCP-VA 562
*********************************************************....9**************************.7* PP
GRAS 184 krledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleak 274
+++ +le+e+L+v++ Ea+aV++ h+l+d ++s ++ +L+l+++l Pkvv+vveq+++h ++sFl rf+ea++yysalfdsl a+
Gorai.006G236200.1 563 DKVGNLEPERLNVSKTEAVAVHWLQ--HSLYDVTGSDTN----TLWLLQRLAPKVVTVVEQDLSH-GGSFLGRFVEAIHYYSALFDSLGAS 646
************************9..999999999999....**********************.789********************** PP
GRAS 275 lpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdr 365
+++eseer++vE++ll++ei+nv+a g +r ++ ++++Wre+l+++GFkp++l +aa+qa lll +++sdgy++ e++g+l lgWkd
Gorai.006G236200.1 647 YGEESEERHVVEQQLLSKEIRNVLALGGPSRSSEEVKFHNWREKLQQSGFKPISLAGNAAAQATLLLGMFPSDGYTLVEDNGALKLGWKDL 737
******************************************************************************************* PP
GRAS 366 pLvsvSaWr 374
L+++SaWr
Gorai.006G236200.1 738 CLLTASAWR 746
********8 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0008356 | Biological Process | asymmetric cell division |
GO:0009630 | Biological Process | gravitropism |
GO:0009956 | Biological Process | radial pattern formation |
GO:0048366 | Biological Process | leaf development |
GO:0051457 | Biological Process | maintenance of protein location in nucleus |
GO:0090610 | Biological Process | bundle sheath cell fate specification |
GO:0005634 | Cellular Component | nucleus |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 759 aa
Download sequence Send
to blast |
MLMAACDLVG ENGGINGRNS NDESPMRSTM RKRMASEVAD YHRFPRRTQF VSDNNMACSF 60 MAATGASNNP NPLFNYSTMN MDNVNTVVPS ANFAALTSAG PAFLSTTASN FSCVDAVGTN 120 TPQPPAVCGF SGLPLFPPTE RNRNTAVDSA AVTATSVNTT VPVSLAPISN SMDDSSATAW 180 IDGVIRDLIH TSSNVSIPQL IHNVREIIYP CNPNLAALLE YRLRSLMDPL ERRRKEAAPP 240 PLHLPEVSLA RHHSQQQQQQ GSSGLTLNLD SAIDSLPNYS LTEPCAMNQY LSWGITPLPI 300 SSNNQVSSSP SATTPPVPSL NQHHRAQEQP LVQENTSPVE KTTASTATVG TTTTAPTSTV 360 ETVQACNGRD RKEELRQQKR DEEGLHLLTL LLQCAEAVSA NNFEDANRML LELSQLSTPF 420 GTSAQRVAAY FSEAISARLV SSCLGICGGL PSIPPSHTQK MVSAFQVFNG ISPFVKFSHF 480 TANQAIQEAF EREERVHIID LDIMQGLQWP GLFHILASRP GGPPHVRLTG LGTSLEALEA 540 TGKRLSDFAD KLGIPFEFCP VADKVGNLEP ERLNVSKTEA VAVHWLQHSL YDVTGSDTNT 600 LWLLQRLAPK VVTVVEQDLS HGGSFLGRFV EAIHYYSALF DSLGASYGEE SEERHVVEQQ 660 LLSKEIRNVL ALGGPSRSSE EVKFHNWREK LQQSGFKPIS LAGNAAAQAT LLLGMFPSDG 720 YTLVEDNGAL KLGWKDLCLL TASAWRPFHA TTTTALHR*
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Functional Description ? help
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Source |
Description |
UniProt | Putative transcription factor involved in asymmetric cell division (By similarity). Required for differentiation of endodermis and graviresponses. {ECO:0000250, ECO:0000269|PubMed:16339910}. |