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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Gorai.004G005200.1 |
Common Name | B456_004G005200 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family |
GRAS |
Protein Properties |
Length: 563aa MW: 63634.3 Da PI: 6.7081 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Gorai.004G005200.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 324.5 | 2.2e-99 | 198 | 558 | 3 | 374 |
GRAS 3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93
e L++cA+ v+ +d++ a+++L+ +++++s+ gd +qR a+ f++AL +rla+++ l+ + +++++ +++l+a+ +++ ++P+ k+
Gorai.004G005200.1 198 ESLTQCAQSVAVNDQRTANEMLKLIRQHSSEFGDGTQRSAHDFANALTTRLAGMGAPLFF--AHLLSNRTSAADALKAYGVYVLACPFKKM 286
689**************************************************9998884..4444444569******************* PP
GRAS 94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvak 184
s++ aN+ I+e +e+++++HiiDf+i +G+QWp+L+q L+++++gp +lRiTg +s +++ + + ++e+++v f+ nv +ak
Gorai.004G005200.1 287 SNFYANKRIMELAEKATTLHIIDFGICYGFQWPCLIQLLSAQAGGPSKLRITGSSS--------HNQVSDLQKGYCERFNVLFKCNV-IAK 368
*****************************************************999........5677777789************9.7** PP
GRAS 185 rledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleakl 275
++e+++leeL++ ++E+++Vn++++l++l+d++vs +s+r++vLkl++s++P+++++ + +n++ F+ rf +al ++sa fd +ea++
Gorai.004G005200.1 369 KWETIQLEELKITKDEVVVVNCMHRLKNLPDDTVSPTSARETVLKLIRSINPELFIHGVANGTYNAPFFFSRFRKALFHFSAQFDIFEATV 459
******************************************************************************************* PP
GRAS 276 preseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrp 366
++++ +r++ E+e+ gr+i+n+vaceg+er+er et+++W+ r + GFk+vpl+++ +k++ +++ + + + v+ + +++++gWk+r
Gorai.004G005200.1 460 AQDDPQRMMFEKEIHGRDIMNLVACEGTERVERPETYKQWQVRTLRTGFKQVPLNQELVKKVMDMVQSSYHRDFVVDVDGHWMLQGWKGRI 550
**********************************************************************999****************** PP
GRAS 367 LvsvSaWr 374
++++S+W+
Gorai.004G005200.1 551 IYALSCWK 558
*******8 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
Sequence ? help Back to Top |
Protein Sequence Length: 563 aa
Download sequence Send
to blast |
MYGFKFDHGS VPMPVYANHN LDNGSKESPI DSSSSSPSSG MSSDSPFPNA MLKYINQMLM 60 EEDLEEKTCM LQDCLALQAA ERSFYEVLCH NYPIPAGLNH YYPDDDCNSS KGTIERLGEG 120 SISPSVDVDK VRGRKNYQRE DVEEGRINKQ LALSLDDSEQ TEMFDDVLLC KGENEDSPKC 180 SLNGNSAQHR QIKRGFMESL TQCAQSVAVN DQRTANEMLK LIRQHSSEFG DGTQRSAHDF 240 ANALTTRLAG MGAPLFFAHL LSNRTSAADA LKAYGVYVLA CPFKKMSNFY ANKRIMELAE 300 KATTLHIIDF GICYGFQWPC LIQLLSAQAG GPSKLRITGS SSHNQVSDLQ KGYCERFNVL 360 FKCNVIAKKW ETIQLEELKI TKDEVVVVNC MHRLKNLPDD TVSPTSARET VLKLIRSINP 420 ELFIHGVANG TYNAPFFFSR FRKALFHFSA QFDIFEATVA QDDPQRMMFE KEIHGRDIMN 480 LVACEGTERV ERPETYKQWQ VRTLRTGFKQ VPLNQELVKK VMDMVQSSYH RDFVVDVDGH 540 WMLQGWKGRI IYALSCWKPV KN*
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