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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Gorai.002G096200.1 |
Common Name | B456_002G096200, LOC105781448 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family |
WRKY |
Protein Properties |
Length: 569aa MW: 61446 Da PI: 6.8796 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Gorai.002G096200.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 96.9 | 1.4e-30 | 223 | 280 | 2 | 60 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60
+DgynWrKYGqK+vkg efprsYY+Ct+++C+vkk ers+ d++++ei+Y+g+H+h+k
Gorai.002G096200.1 223 EDGYNWRKYGQKHVKGCEFPRSYYKCTHPNCEVKKLFERSH-DGQITEIIYKGTHDHPK 280
7****************************************.***************85 PP
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2 | WRKY | 106.3 | 1.6e-33 | 386 | 444 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
ldDgy+WrKYGqK+v+g+++prsYY+Ct agCpv+k+ver+++dpk+v++tYeg+Hnh+
Gorai.002G096200.1 386 LDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHD 444
59********************************************************7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009611 | Biological Process | response to wounding |
GO:0009961 | Biological Process | response to 1-aminocyclopropane-1-carboxylic acid |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 569 aa
Download sequence Send
to blast |
MEEQKLASSS SSSSSSSSAV AAATMQHDLS GSAGSGGARY KLVAPAKLPI SRSACITIPP 60 GLSPSSFLES PVLLSDVKAE PSPTTGSLIK PQAVHASVAC STYSATTACS NAFDERNPST 120 FEFRPHPRSN MAPADLDPQR SEQSQQIQIQ YQAVSFNSSA TVKSEMAGSS NVLSLSVPVH 180 TATSMASAHA EVDAEELNQI GNPNGGMPSG QSDHRGVGPV SSEDGYNWRK YGQKHVKGCE 240 FPRSYYKCTH PNCEVKKLFE RSHDGQITEI IYKGTHDHPK PQPSRRYSSG NIMSGQEERS 300 DKVSSLNGRD DKSYCVYGQM AHSIEPNSTA DISPVTANDD NLDEIEDDDP FSKRRKMDGG 360 IDITPVVKPI REPRVVVQTV SEVDILDDGY RWRKYGQKVV RGNPNPRSYY KCTNAGCPVR 420 KHVERASHDP KAVITTYEGK HNHDVPTAKT GSHDTAGAVA MCGPSRIRSE ENDAISLDLG 480 VGISSVPEHA SNEHQQLHSE LVQSRPQTGG SSFKFVQPTM MAYYGALNGS MNQYVSRENP 540 SEGRGVEITP LNHSYAFPQS MGRILTGP*
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. {ECO:0000250|UniProtKB:Q9SI37}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KF669761 | 0.0 | KF669761.1 Gossypium hirsutum WRKY transcription factor 17 (WRKY17) mRNA, complete cds. |