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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.20G133700.1.p |
Common Name | GLYMA_20G133700, LOC100817334 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
bHLH |
Protein Properties |
Length: 354aa MW: 38710.9 Da PI: 4.597 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.20G133700.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 33 | 1.1e-10 | 277 | 317 | 10 | 55 |
HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
rrRR+riN+++ L+ l+P+ +K++ +++Le+Av+Y+k Lq
Glyma.20G133700.1.p 277 RRRRERINERLRILQHLVPNG-----TKVDISTMLEEAVKYVKFLQ 317
9******************97.....8******************9 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0045944 | Biological Process | positive regulation of transcription from RNA polymerase II promoter |
GO:0005634 | Cellular Component | nucleus |
GO:0001046 | Molecular Function | core promoter sequence-specific DNA binding |
GO:0001228 | Molecular Function | transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding |
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
Protein Sequence Length: 354 aa
Download sequence Send
to blast |
MDPVEQISEE WSSLSGFYTA EEADFMSQLL GNCSLPENLC GNFNLGIPSA IWPGHESTIV 60 SVTGINESPY FHANADNSNT NYLCFSQGSS FTADSSNIFP TTSGNKCDPV ANIGYMSVGF 120 PLGDAKFSPY NVQGSDSQQI NENTDEELGL EVIADKKLQD HQECEVLVSE AAQEDINTNL 180 EKSGKRSRGS MQVRKSKKNV KSMKKPKSDS ISNSEEGRSP DLQGFCSEDD DSNASQELNG 240 GGSSSLSLED STSLKLKGKK STANRGSATD PQSVYARRRR ERINERLRIL QHLVPNGTKV 300 DISTMLEEAV KYVKFLQLQI KLLSSDDLWM YAPIAYNGMN IGLDLNITPT KQP*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC235177 | 0.0 | AC235177.1 Glycine max strain Williams 82 clone GM_WBb0007H11, complete sequence. |