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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.20G060400.2.p |
Common Name | GLYMA_20G060400, LOC100796748 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
CO-like |
Protein Properties |
Length: 410aa MW: 44400.7 Da PI: 4.5679 |
Description |
CO-like family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.20G060400.2.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-B_box | 18.4 | 4.5e-06 | 4 | 44 | 5 | 39 |
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htv 39
+C+ +++++ +C+++ +lC +C + H+ H++
Glyma.20G060400.2.p 4 ICDFCGDQRSMVYCRSDAACLCLSCDRNVHSAnalskrHSR 44
7*****************************65677777765 PP
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2 | zf-B_box | 21.1 | 6.5e-07 | 46 | 88 | 4 | 40 |
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg.......Htvv 40
C++++++++ C + + lC++C +H g H+++
Glyma.20G060400.2.p 46 LLCERCNSQPAFVRCVEEKISLCQNCDWLGH-GtstssstHKRQ 88
57*****************************.547778888765 PP
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3 | CCT | 64.2 | 4e-22 | 352 | 395 | 1 | 44 |
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44
R +a++RYkeK+ktR F+Kk+rY+sRKa+A+ R RvKGrFvk+
Glyma.20G060400.2.p 352 RSNAVMRYKEKKKTRMFDKKVRYASRKARADVRRRVKGRFVKAG 395
899**************************************975 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 410 aa
Download sequence Send
to blast |
MGYICDFCGD QRSMVYCRSD AACLCLSCDR NVHSANALSK RHSRTLLCER CNSQPAFVRC 60 VEEKISLCQN CDWLGHGTST SSSTHKRQAI NCYSGCPSAA ELSSIWSFVL EIAAISESTC 120 EQELGLMSIN ENKCVGVPPE DQNVSGSDEV TDLPALNKSL VGASLMPESS SEPCILDQPA 180 GPTNECLPKL YCPATKCPAL SEDDNLYDDF NMDEVDLDLE NYEELFGMAL SHSEELFENG 240 GIDSLFGTKG MSAGDSNCQE AIAAEGSSVG QVNAMQPACS NAASADSILS TKTEPILCFT 300 GRQTQSNLSF SGVTGESSAG DYQDCGASSM LLMGEPPWFA PCPENSLQSA NRSNAVMRYK 360 EKKKTRMFDK KVRYASRKAR ADVRRRVKGR FVKAGDVYDY DPLSTTRSC*
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