PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.20G049200.2.p
Common NameGLYMA_20G049200
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bZIP
Protein Properties Length: 232aa    MW: 25092.1 Da    PI: 8.1932
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.20G049200.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_126.31.7e-08204230531
                          CHHHCHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeL 31 
                          +r rrk+kNRe+A rsR+RK+ +  +L
  Glyma.20G049200.2.p 204 RRLRRKIKNRESAARSRARKQVYPSCL 230
                          6889*****************998887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1708.7E-7204230No hitNo description
PROSITE patternPS000360207222IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    Send to blast
MGIQTVGSLG NGQQSHLQPS SLSRQGSWYS LTLDEVNCQL GDMGKPLGSM NLDELLQNVW  60
TAEASKSSVV VGVESENMSS SSSSLQRQAS LTLARALSGK TVDDVWREIQ QGQKKKYGED  120
VRSQEGEMTL GETTLEDFLV QAGLFAEASI SPAVGLDAMD SLATQGFQQK TGLLSSSPSI  180
GSLSDTRLGR KRDASDAYEK TLERRLRRKI KNRESAARSR ARKQVYPSCL P*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.505280.0cotyledon
Expression -- Description ? help Back to Top
Source Description
UniprotDEVELOPMENTAL STAGE: Expressed in embryo during the latest stages of seed maturation. {ECO:0000269|PubMed:15642716}.
UniprotTISSUE SPECIFICITY: Predominantly expressed in seeds. {ECO:0000269|PubMed:12376636}.
Functional Description ? help Back to Top
Source Description
UniProtBinds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.20G049200.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0939450.0BT093945.1 Soybean clone JCVI-FLGm-14I20 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001345637.11e-161bZIP transcription factor 27
RefseqXP_028219482.11e-161ABSCISIC ACID-INSENSITIVE 5-like protein 2
SwissprotQ9LES37e-43AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBLA0A0R0EI871e-166A0A0R0EI87_SOYBN; Uncharacterized protein
TrEMBLA0A445F0Z81e-166A0A445F0Z8_GLYSO; ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform C
STRINGGLYMA20G10600.11e-160(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41070.34e-33bZIP family protein
Publications ? help Back to Top
  1. Kim H, et al.
    ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis.
    Plant Mol. Biol., 2016. 90(3): p. 303-15
    [PMID:26667153]
  2. Song C,Kim T,Chung WS,Lim CO
    The Arabidopsis Phytocystatin AtCYS5 Enhances Seed Germination and Seedling Growth under Heat Stress Conditions.
    Mol. Cells, 2017. 40(8): p. 577-586
    [PMID:28756655]