PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja

Family

bZIP

Protein Properties

Length: 232aa MW: 25092.1 Da PI: 8.1932

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Glyma.20G049200.2.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	26.3	1.7e-08	204	230	5	31
CHHHCHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeL 31 +r rrk+kNRe+A rsR+RK+ + +L Glyma.20G049200.2.p 204 RRLRRKIKNRESAARSRARKQVYPSCL 230 6889*****************998887 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	8.7E-7	204	230	No hit	No description
PROSITE pattern	PS00036	0	207	222	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 232 aa Download sequence Send to blast
MGIQTVGSLG NGQQSHLQPS SLSRQGSWYS LTLDEVNCQL GDMGKPLGSM NLDELLQNVW 60 TAEASKSSVV VGVESENMSS SSSSLQRQAS LTLARALSGK TVDDVWREIQ QGQKKKYGED 120 VRSQEGEMTL GETTLEDFLV QAGLFAEASI SPAVGLDAMD SLATQGFQQK TGLLSSSPSI 180 GSLSDTRLGR KRDASDAYEK TLERRLRRKI KNRESAARSR ARKQVYPSCL P*

Expression -- UniGene ? help Back to Top
UniGene ID	E-value	Expressed in
Gma.50528	0.0	cotyledon

Expression -- Description ? help Back to Top
Source	Description
Uniprot	DEVELOPMENTAL STAGE: Expressed in embryo during the latest stages of seed maturation. {ECO:0000269\|PubMed:15642716}.
Uniprot	TISSUE SPECIFICITY: Predominantly expressed in seeds. {ECO:0000269\|PubMed:12376636}.

Functional Description ? help Back to Top
Source	Description
UniProt	Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Glyma.20G049200.2.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	BT093945	0.0	BT093945.1 Soybean clone JCVI-FLGm-14I20 unknown mRNA.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	NP_001345637.1	1e-161	bZIP transcription factor 27
Refseq	XP_028219482.1	1e-161	ABSCISIC ACID-INSENSITIVE 5-like protein 2
Swissprot	Q9LES3	7e-43	AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBL	A0A0R0EI87	1e-166	A0A0R0EI87_SOYBN; Uncharacterized protein
TrEMBL	A0A445F0Z8	1e-166	A0A445F0Z8_GLYSO; ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform C
STRING	GLYMA20G10600.1	1e-160	(Glycine max)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G41070.3	4e-33	bZIP family protein

Link Out ? help Back to Top
Phytozome	Glyma.20G049200.2.p

Publications ? help Back to Top
Kim H, et al. ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis. Plant Mol. Biol., 2016. 90(3): p. 303-15 [PMID:26667153] Song C,Kim T,Chung WS,Lim CO The Arabidopsis Phytocystatin AtCYS5 Enhances Seed Germination and Seedling Growth under Heat Stress Conditions. Mol. Cells, 2017. 40(8): p. 577-586 [PMID:28756655]