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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.19G222000.2.p |
Common Name | GLYMA_19G222000 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
bHLH |
Protein Properties |
Length: 396aa MW: 43825.7 Da PI: 9.8752 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.19G222000.2.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 45.7 | 1.2e-14 | 217 | 262 | 4 | 54 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
hn E++RR++iN+++ +L++l+P++ K++Ka++L A++Y+k L
Glyma.19G222000.2.p 217 VHNLSEKKRREKINKKMRTLKDLIPNC-----NKVDKASMLDDAIDYLKTL 262
5*************************8.....6****************98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 396 aa
Download sequence Send
to blast |
MAKIRVNPPK ARIPASFMKN LQTYLSPLPQ AIVTYNSAYL HLRSRNKEPI QPKHQDQQNA 60 TQQTKNHSSP ARVEEIEALK VDKSAKETQC FQKQTSLTVE RSTKLPTPAV DEHSEAAGHN 120 CGVLGIHRSQ GQTSTSEALR AKAKAYNNNN INMCHEPLLA SSSVCSLGAS NDPNLGFRKH 180 EDTDDSTYLS DNDGEPEDMV KQDREGNRVK RSRNPEVHNL SEKKRREKIN KKMRTLKDLI 240 PNCNKVDKAS MLDDAIDYLK TLKLQLQANF QIMSMGSGLW PLMMGFRPPQ LPIPPLSAIT 300 DNRLIQMFGS PNQIPPMPMP HAPFFPIIGN SATQSHLANN TTTTAAATTN LAEHLANSLH 360 GNATKLAPPS QISFQHHHTS TSTPTLATPF IFPQK*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KT031129 | 0.0 | KT031129.1 Glycine max clone HN_CCL_180 bHLH transcription factor (Glyma19g40980.1) mRNA, partial cds. |