PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.19G146500.1.p
Common NameGLYMA_19G146500
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family G2-like
Protein Properties Length: 379aa    MW: 43208.8 Da    PI: 7.9833
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.19G146500.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like76.14.6e-24230284155
              G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                          k r++Wt++LHe F+  v++LGG+ekA Pk+il++mk + L+++hvkSHLQk R+
  Glyma.19G146500.1.p 230 KRRIKWTKDLHEPFMMIVNSLGGPEKAKPKAILDMMKSDLLSISHVKSHLQKCRS 284
                          689*************************************************996 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.605.6E-21228285IPR009057Homeodomain-like
SuperFamilySSF466896.09E-11229285IPR009057Homeodomain-like
TIGRFAMsTIGR015572.7E-18230284IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 379 aa     Download sequence    Send to blast
MYQYSSQMYG TDWESYMEIS NLAKVVGSEQ LSFEPTKSPF NIVTTPLQTP PGFCASATKS  60
LVSFQAQQQH THQHQSEVPA WCFEFPKTTT MTTTTADSHM LNIRQASGDN FTTTITIKQD  120
PPSSQFTSSL CRPVAESFFS SSGADCRSSS EKYFKIASYS EKHSCIQPDS IQYYDLYSQE  180
DDTLLRDDAA TDEGPLEISF QRNQREKQAP HRLCGVACVA SSNSASRRGK RRIKWTKDLH  240
EPFMMIVNSL GGPEKAKPKA ILDMMKSDLL SISHVKSHLQ KCRSTIHMHK ALQERSKEGQ  300
RTNGESELQV KIHMQIEESR QLQLEVRRNI CQQLEMQRNL HTLIQQQNQQ LKVMLDYQKE  360
RTKLEKTLYT EIEATVPK*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A6e-15229284156Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B6e-15229284156Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A6e-15229284156Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C6e-15229284156Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D6e-15229284156Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F6e-15229284156Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H6e-15229284156Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J6e-15229284156Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.19G146500.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006576853.10.0protein PHOSPHATE STARVATION RESPONSE 3
RefseqXP_028225378.10.0protein PHOSPHATE STARVATION RESPONSE 3-like
TrEMBLA0A445FGN70.0A0A445FGN7_GLYSO; Myb family transcription factor PHL5
TrEMBLK7MYF60.0K7MYF6_SOYBN; Uncharacterized protein
STRINGGLYMA19G32841.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF144901016
Representative plantOGRP7817262
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06800.11e-31G2-like family protein