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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.19G138000.2.p |
Common Name | GLYMA_19G138000, LOC100786651 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
AP2 |
Protein Properties |
Length: 417aa MW: 46389.9 Da PI: 9.0566 |
Description |
AP2 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.19G138000.2.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 54.2 | 3.7e-17 | 60 | 119 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55
s y+GV++++++gr++A+++d ++n+ k+ k+++lg ++ +e Aa+a++ a++k++g
Glyma.19G138000.2.p 60 SIYRGVTRHRWTGRYEAHLWDkSTWNQnqnKKgKQVYLGAYDDEEAAARAYDLAALKYWG 119
57*******************766644468557*************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 417 aa
Download sequence Send
to blast |
MASSSSDPGK SAETSEAAVV VANDQLLLYR GLKKAKKERG CTAKERISKM PPCAAGKRSS 60 IYRGVTRHRW TGRYEAHLWD KSTWNQNQNK KGKQVYLGAY DDEEAAARAY DLAALKYWGP 120 GTLINFPVTD YTRDLEEMQN VSREEYLASL RRKSSGFSRG LAKYRGLSSR WDPSYGRMSG 180 SDYFNSMHYG DDSAAESEYV SGFCIERKID LTSHIKWWGS NKSRHSDAGT RLSEEKKLGS 240 AGDICIEIKQ LEQKVQPTAP YQMPQLGRPQ NEKKHRSSSV SALSILSQSA AYKSLQEKAS 300 KTLENIIDND ENENKNTINK LDHGKAVEKP SNHDGGNDRL DIATGMSGTM SLQRNVYPLT 360 PFLSAPLLTA YNTVDPLVDP VLWTSLVPML PAGLSHTAEV TKTETSSTYT MFRPEE*
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Functional Description ? help
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Source |
Description |
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KT031074 | 0.0 | KT031074.1 Glycine max clone HN_CCL_189 AP2-EREBP transcription factor (Glyma03g29240.1) mRNA, partial cds. |