PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.19G052000.1.p
Common NameGLYMA_19G052000
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family G2-like
Protein Properties Length: 126aa    MW: 13784.9 Da    PI: 9.1143
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.19G052000.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like62.95.9e-2059110153
              G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkY 53 
                          kprl+W +eLH++Fveav q+   +kA  k+i e+m++ gLt+e+v+SHLQk+
  Glyma.19G052000.1.p  59 KPRLVWKQELHQQFVEAVMQI-ALDKAKSKRIIEAMNILGLTREQVASHLQKH 110
                          79*******************.9****************************96 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.608.8E-2257110IPR009057Homeodomain-like
SuperFamilySSF466892.69E-1457110IPR009057Homeodomain-like
TIGRFAMsTIGR015575.9E-1759109IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 126 aa     Download sequence    Send to blast
MKTSIFETSG SDLAKVVVGG MGLEASALLT ARVQEKISSN FKESNSDELD DSFAPPTKKP  60
RLVWKQELHQ QFVEAVMQIA LDKAKSKRII EAMNILGLTR EQVASHLQKH GHELLLLNTS  120
KGVTL*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specific DNA sequence. Functions as a response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. May directly activate some type-A response regulators in response to cytokinins. {ECO:0000250|UniProtKB:Q940D0}.
UniProtTranscriptional activator that binds specific DNA sequence. Functions as a response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. May directly activate some type-A response regulators in response to cytokinins. {ECO:0000250|UniProtKB:Q940D0}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.19G052000.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014627194.16e-29two-component response regulator ARR14
RefseqXP_014627221.11e-29two-component response regulator ARR14-like
RefseqXP_028217064.11e-29two-component response regulator ARR14-like
RefseqXP_028217988.16e-29two-component response regulator ARR14-like
SwissprotB8AEH11e-18ORR23_ORYSI; Two-component response regulator ORR23
SwissprotQ6K8X61e-18ORR23_ORYSJ; Two-component response regulator ORR23
TrEMBLK7MWP92e-85K7MWP9_SOYBN; Uncharacterized protein
STRINGGLYMA19G07198.13e-86(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF3667122
Representative plantOGRP11571753
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.15e-20response regulator 2
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]