PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.17G170100.1.p
Common NameGLYMA_17G170100
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family ERF
Protein Properties Length: 372aa    MW: 40725.2 Da    PI: 4.3848
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.17G170100.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2507.3e-16115163254
                  AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkle 54 
                          +y+GVr++k +g+W++eI+ p +   + r++lg+f taeeA + ++a r++le
  Glyma.17G170100.1.p 115 KYRGVRQRK-WGKWASEIYNPFQ---NNRIWLGTFNTAEEASQVYEARRLELE 163
                          8*******9.********99654...38*******************999997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103218.176115172IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.7E-19115163IPR001471AP2/ERF domain
PfamPF008473.1E-10115164IPR001471AP2/ERF domain
SuperFamilySSF541711.57E-14115162IPR016177DNA-binding domain
SMARTSM003803.6E-13115178IPR001471AP2/ERF domain
CDDcd000181.08E-20115157No hitNo description
PRINTSPR003678.8E-10116127IPR001471AP2/ERF domain
PRINTSPR003678.8E-10138154IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 372 aa     Download sequence    Send to blast
MPECQKQPAS RPKQKLHSLQ ESKAMRKLRI ICDDPDATDS SDDDSKRIQN PRIVKRSMCE  60
ISLLPLLHTF TTLETSSCEL NNKKNTMRVS TKGQPQSKKR VLTHTPSTRR KTPGKYRGVR  120
QRKWGKWASE IYNPFQNNRI WLGTFNTAEE ASQVYEARRL ELEAMAKAQA YKTGSGSAGE  180
PLATTSDKSN CCNSSAAAAA ADVSVSEKFS TTSDDIEESV LPHNSPPSVI EKGNVSTEEA  240
IEANYLVDDL AGLEIPDLSL LNLPPPPSVI EKGNVSTEEA IEANYLVDDL AGLEIPDLSL  300
LNLPPPPSTA GAAVPSGIEP NSGLDFDWLS FDDYEQVFDD FGGLEDIHIS GFDDNEPSEL  360
PDFDFGDFDA D*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.400571e-137pod
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.17G170100.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028242648.11e-163ethylene-responsive transcription factor ERF118-like
TrEMBLK7MM310.0K7MM31_SOYBN; Uncharacterized protein
STRINGGLYMA17G18610.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF26903472
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.24e-20ERF family protein