PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.17G156000.1.p
Common NameGLYMA_17G156000, LOC100803386
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 342aa    MW: 37825 Da    PI: 5.5405
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.17G156000.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.77.7e-12154201355
                          HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                          + h ++Er RR++i +++  L  l+P +     kK++K+++L +A++Y+k+L+
  Glyma.17G156000.1.p 154 QDHIIAERMRREKISQKLIALSALIPDL-----KKMDKVSVLGEAIRYVKQLK 201
                          5699************************.....9*****************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.627151200IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.84E-16154217IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.2E-15155215IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.7E-9155200IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.36E-11156205No hitNo description
SMARTSM003536.8E-13157206IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 342 aa     Download sequence    Send to blast
MTSMEESWTS WLCDMEPDDY SFMGQSDIKV DDVNGTLASP HDVATALLEK NQQSSFSTVE  60
SLSSAAESGL ERPFKLPKIE QLSQKTASSS TPSSYILSFD NTNPPPVTVE SASKPGTKVL  120
NLEKVLPSKN EPRRVVTQQN KKMGSFAGSS HHTQDHIIAE RMRREKISQK LIALSALIPD  180
LKKMDKVSVL GEAIRYVKQL KEQVKVLEEQ SKRKNEESVV FAKKSQVFPA DEDVSDTSSN  240
SCEFGNSDDI STKATLSLPE VEARVSKKSV LIRILCEKEK AVLVNIFREI EKLHLSVVNS  300
SALSFGSSVL DTTIVAEMED EFNMGVKELA RNLRVGLMQF M*
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.17G156000.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003549988.10.0transcription factor bHLH18
TrEMBLI1MVF90.0I1MVF9_SOYBN; Uncharacterized protein
STRINGGLYMA17G16730.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF45534164
Representative plantOGRP6561573
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.16e-55bHLH family protein