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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.17G101000.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
Dof |
Protein Properties |
Length: 472aa MW: 51763.7 Da PI: 6.698 |
Description |
Dof family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.17G101000.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-Dof | 125 | 2.3e-39 | 116 | 176 | 2 | 62 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
++k l+cprC+s++tkfCyynny+++qPryfCkaC+ryWt+GG++rnvPvG+grrknk+s+
Glyma.17G101000.1.p 116 PDKVLPCPRCKSMDTKFCYYNNYNVNQPRYFCKACQRYWTAGGTMRNVPVGAGRRKNKNST 176
78999*****************************************************986 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 472 aa
Download sequence Send
to blast |
MHEIRDPAIR LFGQKIPFPE DVDKEEESAE DREQEMEEHE DEGDKDTRVE NVTKEELEAD 60 PPLDAEETKI SGTSPEAIVN PKTPSIEEET AKSKGGKSEK EQGDAANSQE KTLKKPDKVL 120 PCPRCKSMDT KFCYYNNYNV NQPRYFCKAC QRYWTAGGTM RNVPVGAGRR KNKNSTSHYR 180 HITISEALQA ARIDAQNGTH LPTLKGNGRV LSFGLDAHAP ICDSMASLMN LGEKKALNGT 240 RNGFHHGFED QRLPVPCKSG ENGDDSSTTS SITISSPKGE NNKSTFQQQP LPQNHGFLPQ 300 VPCIPGVPWP YTWNSPVPPP ALCPSGFPLP FYPATFWNCG MPGNWNVPWF SSSSPASNLK 360 SPSSSPNSPT LGKHSRDSDM IKQDSLHKEE ASTPRNGSVL VPKTLRIDDP SEAAKSSIWA 420 TLGIKNESVS GGAMFKAFQS KKGEKNHVEA SPMLMANPAA LSRSLNFHEN S*
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Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Expressed in the vasculature of cotyledons and hypocotyls, leaves and roots. {ECO:0000269|PubMed:19619493}. |
Functional Description ? help
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Source |
Description |
UniProt | Transcription factor that binds specifically to a 5'-AA[AG]G-3' consensus core sequence (By similarity). Regulates a photoperiodic flowering response. Transcriptional repressor of 'CONSTANS' expression. {ECO:0000250, ECO:0000269|PubMed:19619493}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Circadian-regulation. Highly expressed at the beginning of the light period, then decreases, reaching a minimum between 16 and 29 hours after dawn before rising again at the end of the day. {ECO:0000269|PubMed:19619493}. |
Publications
? help Back to Top |
- Duarte JM, et al.
Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. Mol. Biol. Evol., 2006. 23(2): p. 469-78 [PMID:16280546] - Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] - Corrales AR, et al.
Multifaceted role of cycling DOF factor 3 (CDF3) in the regulation of flowering time and abiotic stress responses in Arabidopsis. Plant Cell Environ., 2017. 40(5): p. 748-764 [PMID:28044345] - Renau-Morata B, et al.
Ectopic Expression of CDF3 Genes in Tomato Enhances Biomass Production and Yield under Salinity Stress Conditions. Front Plant Sci, 2017. 8: p. 660 [PMID:28515731] - Henriques R, et al.
The antiphasic regulatory module comprising CDF5 and its antisense RNA FLORE links the circadian clock to photoperiodic flowering. New Phytol., 2017. 216(3): p. 854-867 [PMID:28758689]
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