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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Glyma.17G096700.1.p |
| Common Name | GLYMA_17G096700, LOC100804450 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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| Family |
HD-ZIP |
| Protein Properties |
Length: 330aa MW: 37381.1 Da PI: 4.5536 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Glyma.17G096700.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 59.5 | 5.5e-19 | 82 | 135 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
k+++++ +q++ Le+ Fe+++++ e++++LAk lgL rqV +WFqNrRa++k
Glyma.17G096700.1.p 82 KKRRLSMNQVQFLEKSFEEENKLEPERKTKLAKDLGLRPRQVAIWFQNRRARWK 135
56689************************************************9 PP
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| 2 | HD-ZIP_I/II | 126.5 | 1.1e-40 | 81 | 173 | 1 | 93 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90
ekkrrls +qv++LE+sFeee+kLeperK++la++Lgl+prqva+WFqnrRAR+ktk lEkdyeaL++++++lk++ ++L ke+++L++e
Glyma.17G096700.1.p 81 EKKRRLSMNQVQFLEKSFEEENKLEPERKTKLAKDLGLRPRQVAIWFQNRRARWKTKTLEKDYEALHASFENLKSNYDSLLKEKDNLKAE 170
69**************************************************************************************99 PP
HD-ZIP_I/II 91 lke 93
+++
Glyma.17G096700.1.p 171 VAS 173
875 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 330 aa
Download sequence Send
to blast |
MAASGSSFSN ITSFLRNQQP SSQPLDSSLF LSAPSIFVSG SRSMVSFEAE GGKGCNGSFF 60
RAFDMDDNGD ECMDEYFHKP EKKRRLSMNQ VQFLEKSFEE ENKLEPERKT KLAKDLGLRP 120
RQVAIWFQNR RARWKTKTLE KDYEALHASF ENLKSNYDSL LKEKDNLKAE VASLNEKVLA 180
RGKQEGHMKQ QAESEEETKR LLHLQEQEPP QRLLLESVSE GEGSKVSSVV GGCKQEDISS 240
ARSDILDSDS PHYTDGVNSA LLEHGDSSYV FEHDQSDMSQ DEEDNLSKSL YPSYLFPKLE 300
EDVDYSDPPE SSCNFGFSEE DHALWTWAY*
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| Expression -- UniGene
? help Back to Top |
| UniGene ID |
E-value |
Expressed in |
| Gma.4394 | 0.0 | cotyledon| flower| hypocotyl| leaf| root| somatic embryo| stem |
