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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.16G179900.1.p |
Common Name | GLYMA_16G179900, LOC100788551 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
GRAS |
Protein Properties |
Length: 658aa MW: 72353.5 Da PI: 7.0842 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.16G179900.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 290.2 | 5.4e-89 | 289 | 657 | 2 | 374 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPil 91
+++L+e+A a+ +g++ a ++L+rl+ + + Rl+ +++ AL++r++ + + +e +e++ + +l+ + s ++
Glyma.16G179900.1.p 289 KQTLMEAASAIVEGKHDVAAEILNRLNGVNRS-----DRLTDCMVSALKSRMNP-----GEHP--PPVAELFRKEHAESSQLLLDNSVCF 366
689***********************987654.....69**************9.....2222..222223478999999********** PP
GRAS 92 kfshltaNqaIleavege....ervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfe 177
k+++++aN aIlea+ +e +r ++Df+i++G Q++ Ll+aL++R+++ + ++i +v++ +g +e+++++g+ L+ +Ae+l+++fe
Glyma.16G179900.1.p 367 KVGFMAANYAILEAAFEEktenNRFCVVDFEIGKGKQYLHLLNALSARDQN-AVVKIAAVAE--NGGEERVRAVGDMLSLLAEKLRIRFE 453
*************876554777899***********************766.89********..77************************ PP
GRAS 178 fnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysal 267
f++++++++++l+ e+L ++ +E+l Vn++++l +++desvs+e++rde+L+ vk+l P+vv++veqe++ n+++Fl+r++e+l+yysal
Glyma.16G179900.1.p 454 FKIVATQKITELTRESLGCEVDEVLMVNFAFNLNKIPDESVSTENPRDELLRRVKRLAPRVVTIVEQEINANTAPFLARVAETLSYYSAL 543
***9999*********************************************************************************** PP
GRAS 268 fdsl.eaklpres....eerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk...sdgy 349
++s+ +++++re+ +r+ +E+ l+r++ n vaceg++r+er+e ++kWr+r+++aGF+ pls+++a+++k+ l + + + g
Glyma.16G179900.1.p 544 LESIeATTAGRENnnnnLDRVRLEEG-LSRKLHNSVACEGRDRVERCEVFGKWRARMSMAGFELKPLSQSMAESIKSRLTTANnrvNSGL 632
****5566666665555788999999.9************************************************9998776445679* PP
GRAS 350 rveeesgslvlgWkdrpLvsvSaWr 374
+v+ee+g +++gW++r+L+++SaWr
Glyma.16G179900.1.p 633 TVKEENGGICFGWMGRTLTVASAWR 657
************************8 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 658 aa
Download sequence Send
to blast |
MSSSGFPGGG GASEFFAGVG GFGGRSIPAT SMNNPNAAAS ATNNNLHPLY RTQQQQQQQQ 60 QQNLPAMFLD PSSQIAQRQT PTLIGKRTLT EFQAYNQTNN NPNHVLSNLL LRTVKPRTTF 120 SHNHMDFPVP ELQSQNLYAN QTQRFGVPLL HQLRPQPINL PNNGPVPMTG PNFGYRNSNL 180 GFPPNQNRVR VSPPVSVPVQ VQSSEPEKKI MDHRLLELEK QLLEDNDEEG EADAASVITT 240 SEWSETYQNL ISPGPVQKPV LTTTSPTSST TSSTSSSSSV ASPASGCSKQ TLMEAASAIV 300 EGKHDVAAEI LNRLNGVNRS DRLTDCMVSA LKSRMNPGEH PPPVAELFRK EHAESSQLLL 360 DNSVCFKVGF MAANYAILEA AFEEKTENNR FCVVDFEIGK GKQYLHLLNA LSARDQNAVV 420 KIAAVAENGG EERVRAVGDM LSLLAEKLRI RFEFKIVATQ KITELTRESL GCEVDEVLMV 480 NFAFNLNKIP DESVSTENPR DELLRRVKRL APRVVTIVEQ EINANTAPFL ARVAETLSYY 540 SALLESIEAT TAGRENNNNN LDRVRLEEGL SRKLHNSVAC EGRDRVERCE VFGKWRARMS 600 MAGFELKPLS QSMAESIKSR LTTANNRVNS GLTVKEENGG ICFGWMGRTL TVASAWR*
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Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Expressed in seedlings, roots, leaves and siliques. {ECO:0000269|PubMed:10341448, ECO:0000269|PubMed:18500650}. |
Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor involved in plant development. {ECO:0000250}. |