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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Glyma.16G156700.1.p |
| Common Name | GLYMA_16G156700, LOC100798251 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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| Family |
GRAS |
| Protein Properties |
Length: 472aa MW: 53895.3 Da PI: 7.2664 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Glyma.16G156700.1.p | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 293.5 | 5.7e-90 | 87 | 469 | 1 | 374 |
GRAS 1 lvelLlecAeavss.gdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsP 89
l++lLl+ A+av++ ++ +a + L l +++s +gd++qR++ayf+ +Laarl+ + s y+ l ++ts +ee+ a++ ++ vsP
Glyma.16G156700.1.p 87 LIHLLLSTATAVDDqRNYCAALENLIDLYQTVSLTGDSVQRVVAYFADGLAARLLTKKSPFYDMLMEEPTS----EEEFLAFTDLYRVSP 172
689*********974778899*****************************************999888886....788889999****** PP
GRAS 90 ilkfshltaNqaIleavege.....ervHiiDfdisqGlQWpaLlqaLasRp..egppslRiTgvgspesgskeeleetgerLakfAeel 172
+++f+h+taNqaIlea e+e +++H+iDfd+s+G+QWp+L+q+L++++ ++ slRiTg+g+ + +el+et+ rL +f + +
Glyma.16G156700.1.p 173 YYQFAHFTANQAILEAYEEEeernnKALHVIDFDVSYGFQWPSLIQSLSEKAtsGNRISLRITGFGN----NLKELQETEARLVSFSKGF 258
******************9988887889**********************99755566*********....99***************99 PP
GRAS 173 g..vpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflea 260
g + fef+ l + ++ +Lr k++E++aVnlv l + + + +++L +v slsP +vv+v qe +++ ++Fl rf+e+
Glyma.16G156700.1.p 259 GnhLVFEFQGL---LRGSSRVFNLRKKKNETVAVNLVSYLNTSS----CFMK-ASDTLGFVHSLSPSIVVLVKQEGSRSLKTFLSRFTES 340
73366777775...33455679****************888775....3333.478********************************** PP
GRAS 261 leyysalfdsleaklpreseerikvErellgreivnvva..cegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.s. 346
l+y++a+fdsl+ lp es er k+E+++lg+ei++++ + g + + e++e+W+ r+e+ GF ++s+k + qaklll++
Glyma.16G156700.1.p 341 LHYFAAMFDSLDDCLPLESTERLKIEKKVLGKEIKSMLNydMDGVDYCPKYERMETWKGRMENHGFVGRKISSKCVIQAKLLLKMRThYy 430
**************************************822457778999*********************************9865111 PP
GRAS 347 ......dg...yrveee.sgslv.lgWkdrpLvsvSaWr 374
+g +rv e+ +g ++ lgW++r L++vS+W+
Glyma.16G156700.1.p 431 plqfeeEGgggFRVSERdEGRVIsLGWQNRFLLTVSSWQ 469
111111212336666654555558**************6 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 472 aa
Download sequence Send
to blast |
MEDSEEEELL NLTLSVDAGR KRRKKGRTRD SNNNNSNTNS VIIPIKSNEG MIFRLLQMRE 60
LMLRQDHRIR KGVVEDGINN NKNGLPLIHL LLSTATAVDD QRNYCAALEN LIDLYQTVSL 120
TGDSVQRVVA YFADGLAARL LTKKSPFYDM LMEEPTSEEE FLAFTDLYRV SPYYQFAHFT 180
ANQAILEAYE EEEERNNKAL HVIDFDVSYG FQWPSLIQSL SEKATSGNRI SLRITGFGNN 240
LKELQETEAR LVSFSKGFGN HLVFEFQGLL RGSSRVFNLR KKKNETVAVN LVSYLNTSSC 300
FMKASDTLGF VHSLSPSIVV LVKQEGSRSL KTFLSRFTES LHYFAAMFDS LDDCLPLEST 360
ERLKIEKKVL GKEIKSMLNY DMDGVDYCPK YERMETWKGR MENHGFVGRK ISSKCVIQAK 420
LLLKMRTHYY PLQFEEEGGG GFRVSERDEG RVISLGWQNR FLLTVSSWQP V*
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| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AP015044 | 0.0 | AP015044.1 Vigna angularis var. angularis DNA, chromosome 11, almost complete sequence, cultivar: Shumari. |
