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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Glyma.16G095200.1.p |
| Common Name | GLYMA_16G095200, LOC780552 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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| Family |
bZIP |
| Protein Properties |
Length: 417aa MW: 44472.8 Da PI: 6.4539 |
| Description |
bZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Glyma.16G095200.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | bZIP_1 | 68.3 | 1.2e-21 | 307 | 369 | 1 | 63 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
e+elkr+rrkq+NRe+ArrsR+RK+ae++eL++++++L++eN +L++e+++++ e+++l+se+
Glyma.16G095200.1.p 307 ERELKRQRRKQSNRESARRSRLRKQAECDELAQRAEALKEENASLRSEVSRIRSEYEQLRSEN 369
89***********************************************************98 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 417 aa
Download sequence Send
to blast |
MGSSDMDKTP KEESKTPPAT SQEQSSTTGM PTTNPDWSNF QTYSPIPPHG FLASSPQAHP 60
YMWGVQHIMP PYGTPPHPYV AMYPHGGIYA HPSIPPGSYP FSPFAMASPN GIADASGNAP 120
GSIEVGGKPP EMKEKLPIKR SKGSVSGGNL SMWITGKNNE PGKTPGESAN GIHSKSGESA 180
SDGTSEGSDE NSQNDSQLKS GEKQDSFEDE PSQNGSPVHA PQNGVHNRSQ TVVNQTMPIL 240
PISSTSASGA VPGPTTNLNI GMDYWGTPTS STIPALHGKV PSAAVAGGMI AAGSRDGVQP 300
QVWLQDEREL KRQRRKQSNR ESARRSRLRK QAECDELAQR AEALKEENAS LRSEVSRIRS 360
EYEQLRSENA ALKDRLGEIP GVTTPGKEDL RSGQNDQHVS NDTQQSGQTD VVHGVH*
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| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 323 | 329 | RRSRLRK |
| 2 | 323 | 330 | RRSRLRKQ |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional activator that binds to the G-box motif (5'-CACGTG-3') and other cis-acting elements with 5'-ACGT-3' core, such as Hex, C-box and as-1 motifs. Possesses high binding affinity to G-box, much lower affinity to Hex and C-box, and little affinity to as-1 element (PubMed:18315949). G-box and G-box-like motifs are cis-acting elements defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control (Probable). Binds to the G-box motif 5'-CACGTG-3' of LHCB2.4 (At3g27690) promoter. May act as transcriptional repressor in light-regulated expression of LHCB2.4. Binds DNA as monomer. DNA-binding activity is redox-dependent (PubMed:22718771). {ECO:0000269|PubMed:18315949, ECO:0000269|PubMed:22718771, ECO:0000305|PubMed:18315949}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AF369790 | 0.0 | AF369790.1 Phaseolus vulgaris bZIP transcription factor 2 mRNA, complete cds. |
| Best hit in Arabidopsis thaliana ? help
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| Hit ID |
E-value |
Description |
| AT2G35530.1 | 1e-155 | basic region/leucine zipper transcription factor 16 |
