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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.16G042300.1.p |
Common Name | GLYMA_16G042300, LOC100812088 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
GATA |
Protein Properties |
Length: 282aa MW: 31474.7 Da PI: 6.6509 |
Description |
GATA family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.16G042300.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GATA | 53.8 | 2.6e-17 | 209 | 243 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
C++C + Tp+WR gp g+ktLCnaCG++y++ +l
Glyma.16G042300.1.p 209 CTHCLAQRTPQWRAGPLGPKTLCNACGVRYKSGRL 243
*******************************9986 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0030154 | Biological Process | cell differentiation |
GO:0045944 | Biological Process | positive regulation of transcription from RNA polymerase II promoter |
GO:0005634 | Cellular Component | nucleus |
GO:0005667 | Cellular Component | transcription factor complex |
GO:0000977 | Molecular Function | RNA polymerase II regulatory region sequence-specific DNA binding |
GO:0001085 | Molecular Function | RNA polymerase II transcription factor binding |
GO:0001228 | Molecular Function | transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding |
GO:0003682 | Molecular Function | chromatin binding |
GO:0008270 | Molecular Function | zinc ion binding |
Sequence ? help Back to Top |
Protein Sequence Length: 282 aa
Download sequence Send
to blast |
MNMDMCQNVS VSGECQQVQV FAPSCSSSLD DLFSAQNTEV DVELEWLSEF VEDCFSSPPS 60 CVLVPVGVKT TSTKSTSTSI NPSLKRPQQQ NEPPLQNFAV PGKARSKRKR LSAPRTNKDP 120 LSIWSHHLNP QNEALCSDPP LLKQAYWLAD SELIMPKPKD KEEQQEEVVI MAKEDEEKVI 180 INVSKEISFG DSELDEGSNG QQQPMPRRCT HCLAQRTPQW RAGPLGPKTL CNACGVRYKS 240 GRLLPEYRPA KSPTFVSYLH SNSHKKVMEM RMSVYSISSE Q*
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