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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Glyma.15G044400.2.p |
| Common Name | GLYMA_15G044400, LOC100796271 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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| Family |
AP2 |
| Protein Properties |
Length: 471aa MW: 52024.1 Da PI: 8.7931 |
| Description |
AP2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Glyma.15G044400.2.p | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 52.4 | 1.3e-16 | 136 | 185 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g
Glyma.15G044400.2.p 136 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHIAARAYDRAAIKFRG 185
78*******************......55************************998 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 471 aa
Download sequence Send
to blast |
MLDLNLNAES TQNNESLVLL DKFPEASLGT SNSSVVNAEG SSNEDSCSTR AGDVFAFSFG 60
ILKVEGANEV VATATKELFP VSSENWQGQS STSSSQARKN LMDLPLDHQN GEVKVVQVQP 120
QPQVKKSRRG PRSRSSQYRG VTFYRRTGRW ESHIWDCGKQ VYLGGFDTAH IAARAYDRAA 180
IKFRGLDADI NFDLVDYEED LKQMKNLSKQ EFVHILRRHS TGFSRGSSKY RGVTLHKCGR 240
WEARMGQFLG KKAYDKAAIK CNRREAVTNF EPSIYESEMK PEAINEGGSH DLDLNLGIAT 300
PGHGPKENRG HLQFQSIPYN MHPGRSSRME TNVNSVIGDP SLKRLVVTEE RPSVYSTFFP 360
NLERAERMGI DPSKGVPNWA WQTNGQVNAT PVPPFSTAAS SGFSISATFP STAIFPTKSM 420
NPIPQSFCFT SHSTPCSNAP QFYYEVKSSQ APSQPLSCNT SINGSPPHKF *
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| Functional Description ? help
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| Source |
Description |
| UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). Regulates negatively the transition to flowering time and confers flowering time delay. {ECO:0000250, ECO:0000269|PubMed:14555699}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Repressed by miR172a-2/EAT. {ECO:0000269|PubMed:14555699}. |
