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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.15G044400.1.p |
Common Name | GLYMA_15G044400, LOC100796271 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
AP2 |
Protein Properties |
Length: 486aa MW: 53752 Da PI: 8.4502 |
Description |
AP2 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.15G044400.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 52.4 | 1.3e-16 | 136 | 185 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g
Glyma.15G044400.1.p 136 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHIAARAYDRAAIKFRG 185
78*******************......55************************998 PP
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2 | AP2 | 40.1 | 9.3e-13 | 228 | 275 | 1 | 52 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkk 52
s+y+GV+ +k grW+A+ + +k+++lg f+++ eAa+a+++a+ k
Glyma.15G044400.1.p 228 SKYRGVTLHK-CGRWEARMGQF--L-GKKYIYLGLFDSEVEAARAYDKAAIK 275
89********.7******5553..2.26**********99*********987 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 486 aa
Download sequence Send
to blast |
MLDLNLNAES TQNNESLVLL DKFPEASLGT SNSSVVNAEG SSNEDSCSTR AGDVFAFSFG 60 ILKVEGANEV VATATKELFP VSSENWQGQS STSSSQARKN LMDLPLDHQN GEVKVVQVQP 120 QPQVKKSRRG PRSRSSQYRG VTFYRRTGRW ESHIWDCGKQ VYLGGFDTAH IAARAYDRAA 180 IKFRGLDADI NFDLVDYEED LKQMKNLSKQ EFVHILRRHS TGFSRGSSKY RGVTLHKCGR 240 WEARMGQFLG KKYIYLGLFD SEVEAARAYD KAAIKCNRRE AVTNFEPSIY ESEMKPEAIN 300 EGGSHDLDLN LGIATPGHGP KENRGHLQFQ SIPYNMHPGR SSRMETNVNS VIGDPSLKRL 360 VVTEERPSVY STFFPNLERA ERMGIDPSKG VPNWAWQTNG QVNATPVPPF STAASSGFSI 420 SATFPSTAIF PTKSMNPIPQ SFCFTSHSTP CSNAPQFYYE VKSSQAPSQP LSCNTSINGS 480 PPHKF*
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Functional Description ? help
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Source |
Description |
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). Regulates negatively the transition to flowering time and confers flowering time delay. {ECO:0000250, ECO:0000269|PubMed:14555699}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Repressed by miR172a-2/EAT. {ECO:0000269|PubMed:14555699}. |