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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Glyma.15G030200.6.p |
| Common Name | GLYMA_15G030200 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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| Family |
FAR1 |
| Protein Properties |
Length: 191aa MW: 21989.8 Da PI: 7.237 |
| Description |
FAR1 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Glyma.15G030200.6.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | FAR1 | 83.7 | 3e-26 | 77 | 167 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerr..traetrtgCkaklkvkkekdgkwevtkleleHnHe 88
+fY +Y++++GF+vr++++++s+ n++++ ++fvCskeg+r+++ +++++ + + tr gC+a++++ ++++gkw+vtk+++eH+H+
Glyma.15G030200.6.p 77 EFYIAYGRRIGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKKYLHRKDR-VlpPPPATREGCQAMIRLALRDRGKWVVTKFVKEHTHK 165
6******************************************99883333.2448899******************************* PP
FAR1 89 la 90
l+
Glyma.15G030200.6.p 166 LM 167
97 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 191 aa
Download sequence Send
to blast |
MDHQSGQGFD SDDSDLDMQA EISDKHEKVD EFSKNLEICG GEDEMFVEQP VADISTDIEA 60
VEPFIGMEFN SREEAREFYI AYGRRIGFTV RIHHNRRSRV NNQVIGQDFV CSKEGFRAKK 120
YLHRKDRVLP PPPATREGCQ AMIRLALRDR GKWVVTKFVK EHTHKLMSPS KVPCRGSGKH 180
LVSEYWWGFK *
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AP015040 | 0.0 | AP015040.1 Vigna angularis var. angularis DNA, chromosome 7, almost complete sequence, cultivar: Shumari. |
