 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Glyma.15G027400.14.p |
Common Name | GLYMA_15G027400 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
|
Family |
NF-YA |
Protein Properties |
Length: 268aa MW: 30121.8 Da PI: 8.9168 |
Description |
NF-YA family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.15G027400.14.p | genome | JGI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | CBFB_NFYA | 98.4 | 7.4e-31 | 147 | 203 | 1 | 58 |
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58
+ep+YVN+KQy++Il+RRq Rakle+ +k +k rkpylheSRh+hAl+R+Rg gGrF
Glyma.15G027400.14.p 147 EEPIYVNSKQYHAILRRRQYRAKLEALNKP-IKDRKPYLHESRHQHALKRARGAGGRF 203
69***************************9.**************************9 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0016602 | Cellular Component | CCAAT-binding factor complex |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 268 aa
Download sequence Send
to blast |
MNCLCEKDSG LFSSHSTAPY VLGCPSWATS EFEVQRSSMS RSLSSKVDVL PQQCHNSKTF 60 NFQFQEQDAS STKSTDQSYP EVGQISVQHS STDSTLIRNE GKSMGCVIRS FMGSQDFPFP 120 PPLLDHRPIL PVETAPVRIP LQLDFAEEPI YVNSKQYHAI LRRRQYRAKL EALNKPIKDR 180 KPYLHESRHQ HALKRARGAG GRFLNTKKQL QSNHTPGNIA ESKMHHIENY RDGADVSYAF 240 NSDARNMQND AADKGGGTTQ QPLFVYM*
|
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | AC235312 | 1e-143 | AC235312.1 Glycine max strain Williams 82 clone GM_WBb0071J06, complete sequence. |
GenBank | EU028314 | 1e-143 | EU028314.1 Glycine max clone BAC gmw1-6b18 genomic sequence. |